Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1436 ATGAGTGTGGTGGGGTTTGACATTGGAAATGACAACTGTGTCATTGCTGTAGTGAAGCAACGTGGGATTGATGTTTTACTGAATGATGAATCCAAACGCGAAACGCCTTCAGTGGTCTGCTTTGGGGAGAAGCAAAGGTTTTTGGGGTCAGCTGGTGCTGCGTCTGCTATGATGAACATCAAGTCAACAATATCTCAAGTGAAGAGGCTGATAGGGAGAAAGTATGCAGACCCTGATGTGCAAAATGAGCTGAAAATGCTTCCTGTTGAAACTTCTGAAGGCCAAGATGGTGGCATTTTGGTTCACTTGAAATATCTCAGGGAGACTCATACATTTACACCTGTTCAAATTTTAGCAATGCTCCTTGCTCATTTGAAAACTTCAACTGAAAAGGATTTGGACATGTCAATTTTGGACTGTGTTATTGGGGTCCCATCATACTTTTCAGACTTGCAGAGACGGGCATATCTTGATGCAGCAAGAATCGCTGGGTTGAAGCCTCTGAGATTGATTCATGATTGTACTGCCACTGCTCTTGGTTATGGAATTTACAAAACAGATTTTCATGGAACAGGTCCAACCTATGTAGCATTTGTGGACATTGGTCACTGTGATACTCAGGTCTCCATTGCAGCATTTGAGGCTGGGAAAATGAAGATATTTTCCCATGCTTTTGATAGGAATTTAGGTGCAAGAGACTTTGATGAGGTTCTCTTTAGTCATTTTGCAGCACAGTTTAAGGAACAGTACAACATTGACGTGTACTCTAATATCAAGGCATGTATCAGGCTGCGCATTGCATGTGAGAAGTTGAAGAAAGTTTTGAGTGCAAATCATGAGGCAACTTTAAACATTGAGTGCTTGATGGATGAGAAAGATGTCAAGGGCTTCATCAAGAGGGAGGAATTTGAGCAATTAGCATCAGGGTTATTGGAGAAGATTTGTGTTCCCTGCCAAAAAGCATTATTTGATGCAAGGTTAACTGCAGATAGGATCCATTCTGTAGAGCTAGTTGGCTCGGGTTCTAGGATTCCTGCTATAGCTAGATTATTAACTTCTCAATTCAGGAAAGAACCCAGCCGAACATTGAATGCAAGTGAATGTGTGGCTCGTGGCTGTGCTCTTCAGTGTGCAATGCTCAGTCCTGTTTTCCGTGTTAGAGAATATGAGGTCCTGGATTTGAATCCATTCTCCATTGGACTTTTCTCAGATGATGGTCCAATTAGTGCAGTTTCAAATGGCATACTTTTCCCAAAGGGCCAATCCATTCCAAGTGTTAAAATTCTAACATTTCACCGAAGTAGTTTGTTCCATTTGGAAGCATTTTATGCTAATCCAAATGAACTACCGCCTGGGACATCTCCTAAAATTAGTTGCTTCACGATTGGTCCCTTCCAAGGATCCCATGGCGGTAAGACAAGGGTTAAAGCTAGAGTTCAACTAAATCTGCATGGCATTGTCAGTGTTGAATCAGCTACATTGATTGAAGATCAGGTAGATGATATAAAGGGTAATGATCATTCAAACACTGAATCAATGGATGTTGACCCTAGCATTGATGAGACGGGAGCAAATGGTGTTGAAGATAGTGACAGTAGAAAGGATGAATTTCCACATAAATCTGCTGATTCTGCGAGAAAAGATAAAACTACCAAAAAACACGTGCCAGTGAGTGAGAACATCTATGGTGGAATGACAAAGGCTGAGATCTCGGAAGCTCATGAAAAAGAGCTCCTGTTGACTCAACACGACAGAGCTGTGGAGCGAACCAAAGAAAAGAAGAATAGCTTGGAGTCCTATATTTACGAGATGAGGAGTAAGCTCTTTGACACCTACCGGAGCTTTGCAAATGAGCAAGAGAGGGAGGGCATATCCAGGAGCCTGCAAGAGACTGAAGAGTGGCTTTATGAGGATGGTGATGATGAAACTGAGGTGGCTTACTCGGAAAAACTCGAGGATATAAAGAAGCTTGTGGATCCGATTGAGAATCGGTATAAAGATGAAGAAGCAAGAACACAAGCTACAAGAGATCTGTTGAAGTGCATTATGGATCATCGCAAGTCTGCGGATTCCCTCCTTCCCCAGGATAAAGAATTGATCATTAATGAATGCAATAAGGCAGAGCAGTGGCTGAGAGAGAAATTAGAGCAACAAGATTCCATGCCTAAGGACAATGACCCAATTATATGGTCAAGTGATATTAAAAGCAAGGCAGAGGATTTAAAATCGTTGTGCCAACAGGTGCTGGGATGCAAGGGTTCCTCAACAAATCCAGAGGACAAGGGCAAAGACAAGCCAGATACTCCCAGTAATCTTTGA 2319 0.4222 MSVVGFDIGNDNCVIAVVKQRGIDVLLNDESKRETPSVVCFGEKQRFLGSAGAASAMMNIKSTISQVKRLIGRKYADPDVQNELKMLPVETSEGQDGGILVHLKYLRETHTFTPVQILAMLLAHLKTSTEKDLDMSILDCVIGVPSYFSDLQRRAYLDAARIAGLKPLRLIHDCTATALGYGIYKTDFHGTGPTYVAFVDIGHCDTQVSIAAFEAGKMKIFSHAFDRNLGARDFDEVLFSHFAAQFKEQYNIDVYSNIKACIRLRIACEKLKKVLSANHEATLNIECLMDEKDVKGFIKREEFEQLASGLLEKICVPCQKALFDARLTADRIHSVELVGSGSRIPAIARLLTSQFRKEPSRTLNASECVARGCALQCAMLSPVFRVREYEVLDLNPFSIGLFSDDGPISAVSNGILFPKGQSIPSVKILTFHRSSLFHLEAFYANPNELPPGTSPKISCFTIGPFQGSHGGKTRVKARVQLNLHGIVSVESATLIEDQVDDIKGNDHSNTESMDVDPSIDETGANGVEDSDSRKDEFPHKSADSARKDKTTKKHVPVSENIYGGMTKAEISEAHEKELLLTQHDRAVERTKEKKNSLESYIYEMRSKLFDTYRSFANEQEREGISRSLQETEEWLYEDGDDETEVAYSEKLEDIKKLVDPIENRYKDEEARTQATRDLLKCIMDHRKSADSLLPQDKELIINECNKAEQWLREKLEQQDSMPKDNDPIIWSSDIKSKAEDLKSLCQQVLGCKGSSTNPEDKGKDKPDTPSNL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1436 772 CDD HSPA4_like_NDB 2 381 - -
Lele03g1436 772 SUPERFAMILY Actin-like ATPase domain 193 380 IPR043129 -
Lele03g1436 772 MobiDBLite consensus disorder prediction 500 554 - -
Lele03g1436 772 MobiDBLite consensus disorder prediction 526 554 - -
Lele03g1436 772 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 665 IPR029048 -
Lele03g1436 772 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lele03g1436 772 FunFam Heat shock 70 kDa protein 4 565 675 - -
Lele03g1436 772 Gene3D Actin; Chain A, domain 4 230 313 - -
Lele03g1436 772 Gene3D - 5 374 - -
Lele03g1436 772 FunFam Heat shock 70 kDa protein 4 38 113 - -
Lele03g1436 772 Gene3D - 565 677 IPR029048 -
Lele03g1436 772 Gene3D - 38 113 - -
Lele03g1436 772 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 563 IPR029047 -
Lele03g1436 772 MobiDBLite consensus disorder prediction 757 772 - -
Lele03g1436 772 Pfam Hsp70 protein 3 665 IPR013126 GO:0005524|GO:0140662
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 388 407 - -
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 2 15 - -
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 363 383 - -
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 140 160 - -
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 30 42 - -
Lele03g1436 772 PRINTS 70kDa heat shock protein signature 332 348 - -
Lele03g1436 772 FunFam Heat shock 70 kDa protein 4 1 76 - -
Lele03g1436 772 MobiDBLite consensus disorder prediction 751 772 - -
Lele03g1436 772 MobiDBLite consensus disorder prediction 500 514 - -
Lele03g1436 772 FunFam Heat shock 70 kDa protein 4 230 313 - -
Lele03g1436 772 FunFam Heat shock 70 kDa protein 4 98 194 - -
Lele03g1436 772 Gene3D - 186 360 - -
Lele03g1436 772 PANTHER HSC70CB, ISOFORM G-RELATED 1 755 - -
Lele03g1436 772 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 598 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1436 Lele-ChrLele03 8739876 8744865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1436 4 661 Calmodulin-binding Proteins AT1G16030 30.285 6.31e-84 278