Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1428 ATGGGTCTGTGTATGGGTAAGAGCAAAGATTCAGAGCGAGAATATAATGGATACAGATCAGTTGGGGCAACCGGCGGAGCGCAGAATTACAAAGCCCACGAACCCACTCCTCCTCATCATCAGCCGCATCAATTACCCGAAAAGCCCTCTTCTAGGGCTTCGCTAAACCCTAATAAGCTCGGTCACAATACGATTCTGGGGAAGCAATTCGAAGATGTGAAGCAATTTTACAGGACCGGGAAAGAATTGGGAAGGGGTCAATTTGGTGTGACCTATCTCTGCACTGAGATTTCAACTGGTAGACAATACGCTTGCAAATCAATCTCGAAGAGGAAGCTTACGAGCAGAGCTGATAGAGAGGATATGAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGGCAACCCAATATTGTGGAGTTCAAAGGAGCTTATGAAGATAGTCAATCTGTTCATCTTGTGATGGAGCTTTGTGCAGGTGGTGAGCTCTTTGATCGGATTATTGCAAAGGGACATTACAGTGAAAGAGCAGCTGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGTCACTTTATGGGCGTGATGCATAGAGATCTCAAGCCTGAGAATTTCTTGTTGGCCAGTAAGGATGAAAATGCACTTCTCAAAGCCACAGATTTCGGTTTGTCCGTTTTCATCGAGGAAGGCAAGGTTTATCATGATATAGTTGGGAGTGCTTATTATGTTGCTCCCGAAGTCCTAAAGCGCAAATATGGGAAGGAAATCGACATATGGAGTGCCGGAGTGATACTGTATATCTTACTCAGTGGTGTACCTCCTTTTTGGGCCGAGAATGAAAGGGGAATATTTGATGACATTTTGGAAGGTCATATTGATTTTGAAAGTAAACCATGGCCAAGCATATCAAACAGTGCCAAGGATCTTGTTCGTAAGATGCTGACACAAGACCCAAATAAGCGCATCACTTCTGCTCAGGTTCTTGAACACCCATGGATTAGAGAAGATGGAAATGCATCTGACAAGCCTATAGATAGCGCTGTCCTTTCGAGAATGAAGCAATTCAGAGCAATGAATAAGCTAAAGAAACTTGCCCTCAAGGTCATTGCGGAGAATCTTTCTGAAGAAGAGATCCAAGGGTTGAAGGCAATGTTTACGAATATGGACACTGACAAGAGCGGTACAATCACCTATGAGGAACTAAAGGAGGGATTGCAGAGACTTGGCTCAAAGCTCACAGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGCACCATTGACTACATAGAGTTTATCACTGCCACAATGCATAGACATAGATTAGAGAGAGATGAGCATCTCTACAAAGCCTTCCAGTATTTTGATAAAGATCACAGTGGGTTCATAACGGTAGATGAACTTGAAACAGCCATGAAAGAATATGGCATGGGAGATGAAGGCACAATCAAGGAAATCATATCAGAAGTTGACACAGATAATGATGGTAGAATCAATTATGAAGAATTCTGTGCAATGATGAGGAGTGGAAACCCACAAGGCAAGTTATTCTGA 1575 0.4292 MGLCMGKSKDSEREYNGYRSVGATGGAQNYKAHEPTPPHHQPHQLPEKPSSRASLNPNKLGHNTILGKQFEDVKQFYRTGKELGRGQFGVTYLCTEISTGRQYACKSISKRKLTSRADREDMKREIQIMQHLSGQPNIVEFKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLASKDENALLKATDFGLSVFIEEGKVYHDIVGSAYYVAPEVLKRKYGKEIDIWSAGVILYILLSGVPPFWAENERGIFDDILEGHIDFESKPWPSISNSAKDLVRKMLTQDPNKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYEELKEGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDHSGFITVDELETAMKEYGMGDEGTIKEIISEVDTDNDGRINYEEFCAMMRSGNPQGKLF 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1428 524 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lele03g1428 524 CDD STKc_CAMK 76 334 - -
Lele03g1428 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Lele03g1428 524 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Lele03g1428 524 SUPERFAMILY EF-hand 374 514 IPR011992 -
Lele03g1428 524 PANTHER SERINE/THREONINE-PROTEIN KINASE 71 510 - -
Lele03g1428 524 Pfam Protein kinase domain 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1428 524 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Lele03g1428 524 SUPERFAMILY Protein kinase-like (PK-like) 77 342 IPR011009 -
Lele03g1428 524 SMART efh_1 382 410 IPR002048 GO:0005509
Lele03g1428 524 SMART efh_1 489 517 IPR002048 GO:0005509
Lele03g1428 524 SMART efh_1 418 446 IPR002048 GO:0005509
Lele03g1428 524 SMART efh_1 454 482 IPR002048 GO:0005509
Lele03g1428 524 ProSiteProfiles Protein kinase domain profile. 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1428 524 FunFam Calcium-dependent protein kinase 1 79 162 - -
Lele03g1428 524 CDD EFh 383 442 IPR002048 GO:0005509
Lele03g1428 524 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Lele03g1428 524 SMART serkin_6 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1428 524 FunFam Calcium-dependent protein kinase 1 343 518 - -
Lele03g1428 524 ProSiteProfiles EF-hand calcium-binding domain profile. 490 520 IPR002048 GO:0005509
Lele03g1428 524 Gene3D - 344 517 - -
Lele03g1428 524 Gene3D Transferase(Phosphotransferase) domain 1 163 343 - -
Lele03g1428 524 CDD EFh 457 515 IPR002048 GO:0005509
Lele03g1428 524 FunFam calcium-dependent protein kinase 1 163 342 - -
Lele03g1428 524 MobiDBLite consensus disorder prediction 1 62 - -
Lele03g1428 524 Coils Coil 400 420 - -
Lele03g1428 524 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Lele03g1428 524 MobiDBLite consensus disorder prediction 47 62 - -
Lele03g1428 524 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Lele03g1428 524 Gene3D Phosphorylase Kinase; domain 1 78 162 - -
Lele03g1428 524 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Lele03g1428 524 Pfam EF-hand domain pair 383 443 IPR002048 GO:0005509
Lele03g1428 524 Pfam EF-hand domain pair 453 515 IPR002048 GO:0005509
Lele03g1428 524 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1428 Lele-ChrLele03 8667069 8670735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1428 1 520 EF-hand Containing Proteins AT3G20410 74.954 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele03g1428 Pkinase 5.3e-76 CL0016