Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1361 ATGGCTACTATTTCCACTTTCTACCCTTACAATGCCGTTCGACATTCTTCTTCATCTTTGTCTTCGAATTCGAGCAAGTGGCATCTGTTCTCAAAGTCTACTTGTGGAAGAGGACCACACAAATTCGTGGTGCTCGCGGCGCATTCCAACCCTAAGATTCTGAAGACTAATCGGAAAACGAGGTTCGGACAGGCGCTATCTCCGTATGACAGCGATGCGGATGAGGATGCATTGGAGGACGAGGATGATGATGATGATTGGCTATCTGATGAAGAATTTGCAGAGCCTTCTGACTTTGATTTTAATGACAAGAAATTGAAGTCAAAGACAATAGAAGTAAAAGGTAGGCAACAGGAAAAAAGGCGGGATTTGAGATCATTTGAGAGCCCTAAAATGTTAAAAAGTGAGAAAGTGGCATCCTTTGAACCAAATGGAAGTGTAAAGGTTGGCAGAAATTTAAAGGAGAACAGATATCCTCGATTGTCTGAAGAGATTAATTTGGATAAGAAATGGATTCCACTTCTGGACTACTTAAGCACATTTGGAATGAAGGAATCGCACTTTATCCAAATGTATGAAAGGCACATGTCCTCACTTCAAATTAATGTATGTTCTGCACAGGAAAGGTTAGAATACTTAATGAGTATTGGTGTCAAACATAGAGATGTAAGAAGAATCATTTTGAGACAGCCACAAATTCTGGAGTATACAGTGGAGAACAATTTAAAGGCTCATGTTGCATTTTTGATGGGTTTGGGAATACCCAATTCCAGAGTAGGTCAAATAATTGCTGCTGCTCCATCCCTGTTTTCTTATAGTGTTGAAAAGTCTTTAAAACCAACTGTAAGATATTTAGTTGAGGAAGTTGGCATCAAGGAAAAGGTTCTGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTCGTTCAGCGTATTGACATTTCCTGGAATATTCGGTATATGTTTCTAACAAAAGAGCTGGGAGCACCCAGAGATAGCATAGTGAAGATGGTGACCAAACATCCTCAGCTCCTCCATTATAGCATAGATGGTGGATTACTGCCTAGGATTAACTTTCTGAGGAGCATAGGAATGAGAAATTCAGACATTCTAAAAGTCCTGACTAGTCTTACACAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTCCAGAATGAGGTTCATTCCTTGACCAAATATCCAATGTACCTTAGCTTGTCTTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCCCTGAAGAAAGCTCCAAAAGGACCATTCCCACTTGGATCACTTGTCCCAACTGATGAATGCTTTTGTCAGCAGTGGGCAGGGACTAGTTTGGATAAGTATTTGGCTTTTCGTCAGAGGCTTTTACTCAAGAAATTTGCTGCAAAATATGAAAAATCAAAATAA 1452 0.4043 MATISTFYPYNAVRHSSSSLSSNSSKWHLFSKSTCGRGPHKFVVLAAHSNPKILKTNRKTRFGQALSPYDSDADEDALEDEDDDDDWLSDEEFAEPSDFDFNDKKLKSKTIEVKGRQQEKRRDLRSFESPKMLKSEKVASFEPNGSVKVGRNLKENRYPRLSEEINLDKKWIPLLDYLSTFGMKESHFIQMYERHMSSLQINVCSAQERLEYLMSIGVKHRDVRRIILRQPQILEYTVENNLKAHVAFLMGLGIPNSRVGQIIAAAPSLFSYSVEKSLKPTVRYLVEEVGIKEKVLSKVIQLSPQILVQRIDISWNIRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDGGLLPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELQNEVHSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAAKYEKSK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1361 483 Pfam mTERF 157 430 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 MobiDBLite consensus disorder prediction 64 89 - -
Lele03g1361 483 SMART mt_12 189 219 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 260 292 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 370 402 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 297 329 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 334 365 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Lele03g1361 483 FunFam Transcription termination factor MTERF9, chloroplastic 235 470 - -
Lele03g1361 483 Gene3D Transcription termination factor 3, mitochondrial 233 470 IPR038538 -
Lele03g1361 483 Coils Coil 476 483 - -
Lele03g1361 483 MobiDBLite consensus disorder prediction 72 89 - -
Lele03g1361 483 PANTHER CGI-12 PROTEIN-RELATED 127 256 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1361 Lele-ChrLele03 8231317 8233986 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele03g1361 mTERF 2e-42 No_clan