Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1349 ATGGCCACAAATGATCGCCGTTTTGTAGAATGGAAGGAGCAATTTATTTCACAGGAACGTGGCAATCGCGTAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCAGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGACGAGTTTCTCGAAGTTTGTGGGAAGGAGGGTGCCATACATGCCGGTTTCAAATGGAGGTCCAGAAGAGAGGTGGTGGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCTGGGAGACAAGAGTGTGTCGCCAAGTCATAACTTGACACAAGCTCTTGAGACCACAAATAGCAGTCTCAAAGAATTTATTGATCTGCATACACAGATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACAAAATTCTGACATTGTTTGGTCAGGCGTTGCCTGGACATGTGGCAAACAGCTGAAACATTATCCTGCTTTTTCCAGGAATGGGATCAAAATAGCTATTCAATCTTTCGTCTTTGTCATGGCAACGGGAGAGAATCATTATATTGCATATTTGGAGGACATGTACGAAGACAGGAGGGGTCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCCGTGAGAAATCCTCACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTAATTAGTGCTGAGTGTGTTGATGGCCCGGCCACAGTCTTGACTCGGGAACATTATGAAAAACTCTTGCCTTCTTTTTCTCCTGCCTCATCAAATAGAATCCATTTGTGCTTTAGGCAATTTAGAAACAACAAAGTGAAGGCCTTTGACTTGAGTAAATTGCGTGGCTACCATGATCAACCAATTCTCTCTTGCTTGAACCTTGATTCCTTCCAAAACCCTACATCTAATAACCTTGCAGAAGAGGATGAAGAGTTGAGCCTAGGTGATGATGTAAGGCCTGAAGGTAAGAGGAGCAAAAGAGGTAGAGGGTCTTCTCAGCATTTGGTAGATCGCCGAGTTAGGAAATTAAGTAGAAGTCAACAAATGATGGTGGACAAAACCATCGAGAATGTAGATTATGCTAGGCCAGATAGGAGATTACTTTCCCAGAAACAGGTTGATTATCAGCCCGGGTATAGCTCCAAATACAAAGTTGATGACAAGATAGAGTTACTCTGTCAAGACAGTGGCATTCGAGGCTGCTGGTTCAGGTGTACAGTTGTACAAGTATCCCGGAAACAGATAAAAGTCCAATACAATGATGTGCAGGATGAAGATGAAGGCGGCAATCTTGTGGAATGGATCCCTGCTTTCAAACTTGCCATGCATGATAAACTTGGGATGAGACATTCTGGTCGGCCTACCATCAGGCCAGCCCCAACTCATGAGGGGCAACAAGAACTGGCTATTGAGATCGGAACTGCAATAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTAAGTGGAATTGACTATGGCGATGATGATAATGTTCAAGTTTACTTTCCCGGTGAAGGTCTGTTGAGGAAAATATGCAAGAAGGATCTAAGAGTGTCAAGAGATTGGCTGGGAGACCGATGGGTCGATATTGAGCTAAAGCCTAATGTAGCCTCTACCATATCTGCAGTTAATAGCTCTAACACAAAGTTTTCAGCGTCCCCATCTACCACTAAAGACGTTGACTCTTCTGGGGTTGTTATTTCATGTCAAGATGTTCCTGTTAGTGAGAAATCTAATGAACCAAACGATGTTGCTGAAGACATGAATCAGGTTATTGATAACAAGCCTCCTTCACAAGAAGAGACAAGTACTGAAGTTGTTGGGACTGAGCAACATGGAAGTTGCGATAACGGCAACTATAACAAAGATAACCATGACGACAACAAAGATGATAAGGAAGAGAATGATTGCGATGATAACAAAAGGGTTGATAATGATGTGAAGGATATGGAGGTGTTTGGGACTTCTGGGGAGGACTCGAAAACCGTGGAACCCATGGAAGTGGCTGTTTAA 2043 0.4351 MATNDRRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVADEFLEVCGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQLGDKSVSPSHNLTQALETTNSSLKEFIDLHTQISDKGLLMSSFKGQNSDIVWSGVAWTCGKQLKHYPAFSRNGIKIAIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPQEVFITSYSQVISAECVDGPATVLTREHYEKLLPSFSPASSNRIHLCFRQFRNNKVKAFDLSKLRGYHDQPILSCLNLDSFQNPTSNNLAEEDEELSLGDDVRPEGKRSKRGRGSSQHLVDRRVRKLSRSQQMMVDKTIENVDYARPDRRLLSQKQVDYQPGYSSKYKVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYNDVQDEDEGGNLVEWIPAFKLAMHDKLGMRHSGRPTIRPAPTHEGQQELAIEIGTAIDAWWSDGWWEGVVSGIDYGDDDNVQVYFPGEGLLRKICKKDLRVSRDWLGDRWVDIELKPNVASTISAVNSSNTKFSASPSTTKDVDSSGVVISCQDVPVSEKSNEPNDVAEDMNQVIDNKPPSQEETSTEVVGTEQHGSCDNGNYNKDNHDDNKDDKEENDCDDNKRVDNDVKDMEVFGTSGEDSKTVEPMEVAV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1349 680 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Lele03g1349 680 MobiDBLite consensus disorder prediction 629 665 - -
Lele03g1349 680 Pfam Agenet domain 394 468 IPR008395 -
Lele03g1349 680 MobiDBLite consensus disorder prediction 603 628 - -
Lele03g1349 680 SMART BAH_4 167 287 IPR001025 GO:0003682
Lele03g1349 680 SMART agenet_At_2 476 534 IPR014002 -
Lele03g1349 680 SMART agenet_At_2 389 454 IPR014002 -
Lele03g1349 680 MobiDBLite consensus disorder prediction 310 347 - -
Lele03g1349 680 Gene3D - 136 300 IPR043151 -
Lele03g1349 680 MobiDBLite consensus disorder prediction 603 680 - -
Lele03g1349 680 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 390 643 - -
Lele03g1349 680 Pfam BAH domain 170 259 IPR001025 GO:0003682
Lele03g1349 680 MobiDBLite consensus disorder prediction 324 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1349 Lele-ChrLele03 8160027 8163534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1349 403 532 PHD Transcription Factor Family AT5G58610 27.068 3.76e-10 61.6