Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1348 ATGGGGTTATCTAAAGTTTCAGTTTTTCCACTTTTGGTTTTCTGGGTTTGTGTTCAGTTGAATTCAGCAGAAGGTCTCTCATCCTACGATTCCTACGACCAAAACAATGTCAGAAACTACATTAGCTGGAAGGATTTATGGGTGGACGAACAGAGGTTGACTTGGGACCCCATTGAAGATGCTCGCGTTATTGTCGTTGACCAGCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTAGATATGGTCCCTGATAACAACTCAGAAAGAATCAAAATTTACATATACCCTGGAATTTACAGAGAGAGAGTGTATGTGCGAAGAACGAAAGGGTATGTATCAATGATAGGAGGACGAAATGGAGCAGAGAGTGCAGTAATTACATGGAACAGTAAATCATCGGACAGAGGTTTTGATGGACAAGAACTTGGGACCTATGCTTCTGCAACTGTCAATGTAGAATCTGCTTATTTCTGTGCAACCACGCTCACTTTTGAGAACTCGGTGGAGGCCGTGAATGGAGGAGATGGAATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGATACTCTGTTGGATAACACAGGCACTCATTATTTCTATCAGTGTCAAATCCAGGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTATCAGAACTGTGATATTCATTCAATAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGAATGCAGAAGATGAAGAGACAGGCTTCTCCTTTGTAAATTGCTCAATCACAGGCACTGGCAGTGTTTACCTTGGCAGAGCCTGGGGTAATTATTCTAGAATCATCTACTCTCTCTGCTATATGGATGATATCATCATCCCTGAAGGCTGGACTGAATGGAATCACCCATCCAGAAAGATGACTGCTATGTTTGGGGAGTACCAGTGTGTGGGAATGGGAGCAGATAGGAGAGGAAGGGTAGAATGGTCAAAATCTTTGAGCTATGAGGAAGCAAGGCCTTTTCTGGATAAGACTTTCATAAATGGGGACCAGTGGCTTATGCTATAG 1089 0.4334 MGLSKVSVFPLLVFWVCVQLNSAEGLSSYDSYDQNNVRNYISWKDLWVDEQRLTWDPIEDARVIVVDQHGRGHSRTVQGAVDMVPDNNSERIKIYIYPGIYRERVYVRRTKGYVSMIGGRNGAESAVITWNSKSSDRGFDGQELGTYASATVNVESAYFCATTLTFENSVEAVNGGDGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNAKSLYQNCDIHSIAETYGAIAAHHRNAEDEETGFSFVNCSITGTGSVYLGRAWGNYSRIIYSLCYMDDIIIPEGWTEWNHPSRKMTAMFGEYQCVGMGADRRGRVEWSKSLSYEEARPFLDKTFINGDQWLML 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1348 362 FunFam Pectinesterase 59 362 - -
Lele03g1348 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 59 360 - -
Lele03g1348 362 SUPERFAMILY Pectin lyase-like 61 360 IPR011050 -
Lele03g1348 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Lele03g1348 362 Gene3D - 59 362 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1348 Lele-ChrLele03 8157634 8159379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1348 11 313 Carbohydrate Esterase AT5G55590 55.728 1.41e-125 362