Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1337 ATGTGGGCAACGTGGGGATGGCAGAATATTTCGAACCAGCTCAAGTTTTACAAGAGAAAGTGGGTCACTTTATTTGTTTTCTCCACTCGCAATCTTCCTAATTTCATGTCTTGTTCTGGTTCCTGTTACTGTTATTTCTACTTGTTTCACATGAAATTTGGGAAGCTCATTATTGGGCTGTTTGTGTATCTGGTTGTACAAATCTTGATCATCAACTTGCATGATTATGCATATGAGCGAGACAGAGTTAGGCAACTCTGGAATAAGATTGAATGTTTAACAGGGATTGAGCAACTTGCTGTCGTGATAAAAAAGAGTAAGCATCTAGTAGTGTTCACAGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTAGAGGCCCCGAGGGAATTTGGACGCTTCAGCATGAAGGCAAACCGTTGCCTGAAGCATCTCTGCCATTTCATCGTGCAGTGCCAAGCTTGACTCACATGGCTCTGGTAGAATTAGAAAAGGCTGGTATATTAAAGTTTGTTATCAGTCAGAATATTGATGGTCTCCATCTTCGTTCTGGAATACCAAGGGAGAAACTAGCAGAATTGCATGGGAACTCCTTTATGGAAACATGCCCTTCCTGTGGAGCTGAGTACTTTCGAGATTTTGAGGTTGAAACTATTGGGTTGAAGGAGACATCAAGGCGTTGTTCAGATGCAAATTGTCGAAAAAGACTTAAGGATACTGTTCTTGACTGGGAGGATGCGCTGCCTCTGAAAGAAATGGGTACTGCAGAGAAGCACTGCAGAGAGGCAGATACTGTTTTATGCTTAGGGACAAGTCTGCAAATAACTCCGGCTTGCAACTTGCCGCTAAAAGCACTTCGTGGTGGGGGTAAAATTGTCATTGTAAACCTCCAGAAAACTACAAAGGACAAAAAGGCCAGCTTGGTCATCCATGGGCTAGTAGATAAGGTAATTGAAGGAGTCATGAACTTGCTTAGTCTGCAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATCATTATAAATCAAGCTTTGAGCAATGATAAAAGATACGTGAACTGGACTCTCTGGGTTGGAAGTGCACATGGGCAGAAAGCTGCATTGTCATTTATCAAGTCCGTTGAGGTCTCCTTCTTAGACAAAGAAGAATACAAATCAGCCATACTGAATACACAACCATTTCGCCTTAAAAGGAGAACAGCACTGAACCAAGCGTTTGAAATGGTTCTGAAAATGAGCTTCAGTGAAGGCTGTGGTTGCACCTCCATCGAAATCGATGTCCTTGTTGATTTCAAGGTTTCAAGTGACAGCTTTAGCTTTGACAAGGAAGTGATATTCCAGAAGCTGAGAGACAAAGCAATTGTTGAATCAAAATGTGGGCAGAATGCTGTTATAGAGAGAATATTGGCACCAAGAAGCAATGTCACTGTGCATGCTGTTGTCACCAATCTTGTTCATTACAGCAAAGGCTATAAAACATGTCCCCATGAATCTCTTGAACCACACTGTTCTGCTCCCATACTCTCTTCTTCTTCTCAGACTGATTCAAGAAGAAAAAAAAAAGCCGCCATGGAAGGTTCAGGAAGTCCTTTCTTTCCCTCTGGCCACCACCAACCTGCAACTGCAAGCTCTGCTTCGAATCTGTTGGGCGCAGCAGCGAACCCTGCCGGACAAGGCGGAGCTCCGGAGAACCCAAACCAGAATCGGCAGCAGCAGCAGCCTGCGCAATGCGGGATGATGAGAGAACAGGACCAGTACATGCCGATCGCGAACGTCATCAGAATCATGCGTCGGATCCTTCCGGCGCACGCTAAGATCTCCGATGAAGCCAAAGAGACGGTTCAAGAATCCGTCTCTGAGTACATCAGCTTCATTACCAGCGAGGCGAACCAGCGGTGCAGGCAGGAGCAGCGTAAGACGGTGACGGCGGACGACCTGCTTTGGGCAATGGAGAAGCTGGGTTTTGACAACTACGTGGGGCCTCTCTCTCTCTATCTCCACCGTTACCGTAATGGCGAGGGTGGTTTCGGTGGCCACTATGTCCCACGGGCGCAGCCGCCACAAGTGCAGGCTCCTCCAGAGCTCCCACCAGCAATGCCACCACTTCCGCCGCCACCGTACTATTACGGGTCGGGTTATAATTATCCAGTGTCGCCGAATCAGATGGGGCCGTCCGGTGCTGGTAGCTCAAGCAGTGGTGCTGGTGGTGCTCCGGCGTATTATGATCCGTTTGCTCACCTGAGAAATGACCGTTTCTGA 2265 0.4667 MWATWGWQNISNQLKFYKRKWVTLFVFSTRNLPNFMSCSGSCYCYFYLFHMKFGKLIIGLFVYLVVQILIINLHDYAYERDRVRQLWNKIECLTGIEQLAVVIKKSKHLVVFTGAGISTSCGIPDFRGPEGIWTLQHEGKPLPEASLPFHRAVPSLTHMALVELEKAGILKFVISQNIDGLHLRSGIPREKLAELHGNSFMETCPSCGAEYFRDFEVETIGLKETSRRCSDANCRKRLKDTVLDWEDALPLKEMGTAEKHCREADTVLCLGTSLQITPACNLPLKALRGGGKIVIVNLQKTTKDKKASLVIHGLVDKVIEGVMNLLSLQIPPFVRIDLFQIIINQALSNDKRYVNWTLWVGSAHGQKAALSFIKSVEVSFLDKEEYKSAILNTQPFRLKRRTALNQAFEMVLKMSFSEGCGCTSIEIDVLVDFKVSSDSFSFDKEVIFQKLRDKAIVESKCGQNAVIERILAPRSNVTVHAVVTNLVHYSKGYKTCPHESLEPHCSAPILSSSSQTDSRRKKKAAMEGSGSPFFPSGHHQPATASSASNLLGAAANPAGQGGAPENPNQNRQQQQPAQCGMMREQDQYMPIANVIRIMRRILPAHAKISDEAKETVQESVSEYISFITSEANQRCRQEQRKTVTADDLLWAMEKLGFDNYVGPLSLYLHRYRNGEGGFGGHYVPRAQPPQVQAPPELPPAMPPLPPPPYYYGSGYNYPVSPNQMGPSGAGSSSSGAGGAPAYYDPFAHLRNDRF 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1337 754 MobiDBLite consensus disorder prediction 536 553 - -
Lele03g1337 754 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 98 196 - -
Lele03g1337 754 SUPERFAMILY DHS-like NAD/FAD-binding domain 93 353 IPR029035 -
Lele03g1337 754 CDD SIRT7 107 314 - -
Lele03g1337 754 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 589 652 IPR003958 -
Lele03g1337 754 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 96 328 - -
Lele03g1337 754 Gene3D Histone, subunit A 565 677 IPR009072 GO:0046982
Lele03g1337 754 ProSiteProfiles Sirtuin catalytic domain profile. 97 331 IPR026590 -
Lele03g1337 754 PRINTS CCAAT-binding transcription factor subunit A signature 654 672 - -
Lele03g1337 754 PRINTS CCAAT-binding transcription factor subunit A signature 635 653 - -
Lele03g1337 754 PRINTS CCAAT-binding transcription factor subunit A signature 616 634 - -
Lele03g1337 754 MobiDBLite consensus disorder prediction 562 581 - -
Lele03g1337 754 FunFam NAD-dependent protein deacetylase SRT1 197 246 - -
Lele03g1337 754 Gene3D - 98 324 - -
Lele03g1337 754 MobiDBLite consensus disorder prediction 507 581 - -
Lele03g1337 754 Gene3D - 197 246 - -
Lele03g1337 754 FunFam Nuclear transcription factor Y subunit B-6 577 688 - -
Lele03g1337 754 SUPERFAMILY Histone-fold 585 675 IPR009072 GO:0046982
Lele03g1337 754 Pfam Sir2 family 149 278 IPR003000 GO:0070403
Lele03g1337 754 Pfam Sir2 family 114 135 IPR003000 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1337 Lele-ChrLele03 8068078 8078478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1337 541 679 CCAAT-HAP3 Transcription Factor Family AT5G47670 60.432 1.24e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele03g1337 SIR2 1.4e-20 CL0085