Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1311 ATGCCTGCAAGCTTAAGAAATCCCTTACTTCTCTCAATAAACTCTCTTCTCTTCTTCTCCTTCTCCTTCTCATGTTGCTACTCCATTGATGAACAAGGCCAAGCTCTTATTGCATGGAAGAACAGTTTGAACAGTACAGGAGATGCAGTGTTAGCATCATGGAGTCCTTCCGATTCATCCCCTTGCAAATGGGATGGTGTTCTCTGCAACTCCAGAGGAGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATTGCCTTCAAATTTTCAAGCTTTCAAGTCTTTGAAGGTTCTTGTGCTGTCATCCACCAACCTAACAGGTTCTATCCCAAGAGAAATTGGAGGCTGTGGAGAGCTTGTTTCTATTGATCTCAGTGGGAATTCTCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTTGAGAGTTTGTCTCTCCATGCAAACTTTCTTGAAGGTAATGTTCCATCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACAAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGTTTTTAAGAAGTCTTCAAGTTTTCAGAGCAGGGGGGAATAAGAACCTAAAAGGTGAGCTGCCATGGGGGATTGGAAACTGCACCAGCTTGGTCATGTTGGGCCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGCTGAGGAACATTCAAACCATAGCTATTTACACAACGCTATTGTCAGGCTCAATTCCGGAGGAGATTGGGAATTGCAGTGAGCTGCAGAATTTGTATTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAACTTGGAAATCTCAGAAAGATTCAGAGTATTCTCTTATGGCAGAATAATCTAGTGGGGACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGAAGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTATTATACCTCCTGAGATTACAAACTGCACTTCTCTGACTCAGTTGGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGCAACTTGAAAAGCTTGAATCTTTTCTTTGCATGGCAGAACAAGCTCACTGGGAAAATCCCAGATAGTCTCTCTGAGTGCCAAGATCTTGAGGCACTTGATCTGTCTTACAACAATCTGATTGGTTCAATACCAAAATCAACTTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTCTTTCCAATGAATTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCACAAGTCTCTACAGGTTAAGGTTGAACAGAAATAGATTTTCTGGGTTCATTCCACCTGAGATTGGAACCTTGAAGAACCTCAACTTTATGGATATGAGCAACAATCACTTTGTGGGGAAGATTCCTTCAACGTTATCTGGATGCGAGAACCTTGAGTTCATTGATCTTCATTCAAATTCTCTCACTGGTTCAATCCCAGAGGCTCTCCCCAGAAGTCTAAGATTAATGGATTTCTCAGATAATAGGCTCACTGGTTCGTTGAGTCGTACCATTGGTTCATTGAGTGAACTAACAAAACTCAATCTGGGAAAGAATCAACTCAGTGGGAAAATCCCAGAAGAGATTTCATCTTGTTCTAAGCTTCAACTTCTTGACCTGGGAAGCAATGATTTCGCTGGAGAAATTCCAGAGCAATTGGGTCAAATCCCATCGTTGGAAATCTCTTTAAATCTCAGCTTTAATCAATTTTCTGGGCAAATCCCATCTCAAATCTCTGGTCTCACTAAACTGGGTGTTCTTGATATCTCCCACAACCACCTCTCAGGGAATCTAAATCCTCTCTCTGACCTTCAAAACCTCGTTTCCTTAAACGTTTCCTTCAACTACTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAAGCTTCCTTTAAGTGACCTCACCCCGAATAAAGGCCTCTACATCGCCGGCGGCGACGGTTTGACTCCCGTCGACGGAGTGGGACCCAGTAAAGTCCATGCCACATCAGCAATGAAGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAGTACTTGTACTACTCACAATCTATGCTTTGGTACGTTCTCATATTCAAAACAGAGCAATCATGGAAGATAGTTCATGGGAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACGGGAAGCTCCGGCGTGGTGTACAGGGTAACAATCCCCACCAGCTCCATCGGCGAACTAGCCGTTAAAAAGATGTGGTCTTCAGAAGAATCCGGAGCATTCGAATCCGAGATTCGAACTCTGGGTTCAATCCGACACAAGAACATCGTCAGACTCCTAGGTTGGGGATCCAACAAGAACATCAAGATTCTCTTCTACGACTACCTCCCCAACGGCAGCCTCAGCTCGATGCTTCACGGTTCCGGAAAAGGATGTGCAGATTGGGAAACCAGGTACGAGGTTGTGGTCGGTGTAGCTCACGCCCTGGCTTATTTACACCACGATTGCGTCCCTCCAATTCTCCACGGAGACGTCAAAGCCATGAACGTGTTACTGGACGACAGGTTTCAAGCTTATCTCGCAGATTTCGGCTTAGCGAGAATCGTTCAGGAAAAAGACGACGCTCATCATCATCATCATTCTGATCCTAAACCACTTCATAAAACATATCTCGCTGGTTCTTACGGTTACATGGCTCCAGAACATGCATCGATGCAGAGGATCACAGAGAAGAGTGACGTGTATAGTTATGGTGTGGTTCTGTTGGAGGTGTTGACTGGGAGGCATCCACTGGACCCGACTCTACCAGGTGGTGCACACATGGTTCAGTGGGTTAGGAACCACTTAGCCAATAAAGGAGGCCCATCTGATATTTTGGACCCAAAGCTGAGAGGGAGGGCTGACCCAGCCATGCATGAGATGCTTCAGACTTTGGCTGTGTCGTTTCTGTGTGTCAGCACTAAGCCTGAGGATCGTCCTACGATGAAGGACGTTGTGGCTATGCTTAAAGAAATCAGACCTGTTGATCAGTCCTCAAAGTTGGATTCTGATGAACTGAAGAAGAAGGCTAAATCTTCGTTACATGGCTCACCATATCCAGTTCCACCACCTAAGCGTCTCGTCTCGCATCAGTCTTCTAACTGTTCCTTTCATTTCTCAGATGACTCAGTCTAA 3315 0.4446 MPASLRNPLLLSINSLLFFSFSFSCCYSIDEQGQALIAWKNSLNSTGDAVLASWSPSDSSPCKWDGVLCNSRGDVEEISLKSVDLKGSLPSNFQAFKSLKVLVLSSTNLTGSIPREIGGCGELVSIDLSGNSLSGEIPEDICRLSKLESLSLHANFLEGNVPSNIGNLSSLVNLTLYDNKLSGEIPKSLGFLRSLQVFRAGGNKNLKGELPWGIGNCTSLVMLGLAETSISGSLPSSIGMLRNIQTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGPIPSQLGNLRKIQSILLWQNNLVGTIPEELGSCTELKVIDFSENLLTGSIPRSFGKLSNIEEIQLSVNQLTGIIPPEITNCTSLTQLEVDNNALSGEIPALIGNLKSLNLFFAWQNKLTGKIPDSLSECQDLEALDLSYNNLIGSIPKSTFGLRNLTKLLLLSNELSGFVPPDIGNCTSLYRLRLNRNRFSGFIPPEIGTLKNLNFMDMSNNHFVGKIPSTLSGCENLEFIDLHSNSLTGSIPEALPRSLRLMDFSDNRLTGSLSRTIGSLSELTKLNLGKNQLSGKIPEEISSCSKLQLLDLGSNDFAGEIPEQLGQIPSLEISLNLSFNQFSGQIPSQISGLTKLGVLDISHNHLSGNLNPLSDLQNLVSLNVSFNYFSGELPDTPFFKKLPLSDLTPNKGLYIAGGDGLTPVDGVGPSKVHATSAMKFIMSILLSISAVLVLLTIYALVRSHIQNRAIMEDSSWEMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPTSSIGELAVKKMWSSEESGAFESEIRTLGSIRHKNIVRLLGWGSNKNIKILFYDYLPNGSLSSMLHGSGKGCADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLDDRFQAYLADFGLARIVQEKDDAHHHHHSDPKPLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLANKGGPSDILDPKLRGRADPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRPVDQSSKLDSDELKKKAKSSLHGSPYPVPPPKRLVSHQSSNCSFHFSDDSV 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1311 1104 SUPERFAMILY RNI-like 282 603 - -
Lele03g1311 1104 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 843 1068 - -
Lele03g1311 1104 Gene3D Phosphorylase Kinase; domain 1 729 842 - -
Lele03g1311 1104 FunFam Leucine-rich receptor-like protein kinase family protein 332 604 - -
Lele03g1311 1104 MobiDBLite consensus disorder prediction 1057 1072 - -
Lele03g1311 1104 SMART LRR_sd22_2 313 342 - -
Lele03g1311 1104 SMART LRR_sd22_2 265 291 - -
Lele03g1311 1104 SMART LRR_sd22_2 551 574 - -
Lele03g1311 1104 SMART LRR_sd22_2 624 643 - -
Lele03g1311 1104 SMART LRR_sd22_2 144 170 - -
Lele03g1311 1104 FunFam Leucine-rich receptor-like protein kinase family protein 29 188 - -
Lele03g1311 1104 SUPERFAMILY L domain-like 29 306 - -
Lele03g1311 1104 ProSiteProfiles Protein kinase domain profile. 767 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1311 1104 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 529 1050 - -
Lele03g1311 1104 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lele03g1311 1104 MobiDBLite consensus disorder prediction 1057 1104 - -
Lele03g1311 1104 SMART LRR_typ_2 337 361 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 433 457 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 289 313 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 551 575 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 481 505 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 144 168 IPR003591 -
Lele03g1311 1104 SMART LRR_typ_2 96 120 IPR003591 -
Lele03g1311 1104 Gene3D Ribonuclease Inhibitor 527 604 IPR032675 -
Lele03g1311 1104 SUPERFAMILY Protein kinase-like (PK-like) 750 1049 IPR011009 -
Lele03g1311 1104 ProSitePatterns Protein kinases ATP-binding region signature. 773 798 IPR017441 GO:0005524
Lele03g1311 1104 Gene3D Ribonuclease Inhibitor 427 526 IPR032675 -
Lele03g1311 1104 Gene3D Ribonuclease Inhibitor 605 688 IPR032675 -
Lele03g1311 1104 SUPERFAMILY L domain-like 605 667 - -
Lele03g1311 1104 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 189 280 - -
Lele03g1311 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Lele03g1311 1104 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 690 - -
Lele03g1311 1104 MobiDBLite consensus disorder prediction 1087 1104 - -
Lele03g1311 1104 Gene3D Ribonuclease Inhibitor 28 203 IPR032675 -
Lele03g1311 1104 Gene3D Ribonuclease Inhibitor 204 426 IPR032675 -
Lele03g1311 1104 Pfam Leucine rich repeat 528 588 IPR001611 GO:0005515
Lele03g1311 1104 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Lele03g1311 1104 ProSiteProfiles Leucine-rich repeat profile. 626 648 IPR001611 GO:0005515
Lele03g1311 1104 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Lele03g1311 1104 Pfam Protein kinase domain 770 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1311 1104 SMART serkin_6 767 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1311 1104 Gene3D Transferase(Phosphotransferase) domain 1 843 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1311 Lele-ChrLele03 7895389 7898793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1311 26 1104 Receptor kinase-like Gene Family AT5G56040 66.083 0.0 1408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele03g1311 Pkinase 1.9e-37 CL0016