Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1310 ATGGATAAGTTAAGGCATGGACAAGCTGTAGATATTCCAAACTATGACTCAAAGAGTTACAAGAGTGATGTGTTTCCAGCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGCTGATGAATATGAAGATATTTGTCGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTTGTGAGAAGGCTCGGGATATTGACTTAGTGCTTGATCAGGCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATCATACCCCGCGGAGGAGATAATCACGTGGCCATTGATTTGATCGTACAGCATATCCGAACAAAGCTTGGTCAACATGATTTGTGTAAAATATATCCTAATTTATATGTCATTCAAACAACTTTTCAGATAAGGGGTATGCACACCCTGATACGTGATTCTCAGACAACGAAGCATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTATGTATACAGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACTGAAAAGCAAGTAATAACTCCAACTGTGCTGAATGCTGTAATGTGTATTGTGGCTTACGGTGCATCATTCTCATCTCTTTTACTATTGGTAGTGTTGGATGTACATGACGGTTTATTGTTTATCAACTTCTGGCTTTTTATGGTGAAAACTGATTCTTTTCCTTCACATGAATCTGCAGAATCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCCAACGATATCTCAGATAGACATGTGTTACTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTCTCAGAAAGGGTGTTCCAGAGTCCAACATTATATTTCTCAACCTCATATCAGCACCTCAAGGTGTGCACATGGTCTGCAAGAAATTTCCGAGAATAAAGATAGTGACATCTGAGATTGATTTTGGTTTGAATGAAGATTTTCGTGTTGTACCTGGCATGGTGGGAGATTGTGCCAATCTTCCTTTAAGATTGCTTCTTGAATGTGCAAAGAGTGGAGAAAGTTTTAGTTACCTTTTCATAATGTCTCCTTGCTTGTCTATTTTATCGAAACGAAAAAATCAGTGTATTGAATTCAATGATGGGTTGAGAGAAATGAGGCAAGAAAGGACTAAAAGTGTTATGTTATCTTATGGCTGTGAACAGATGGAAGAGGTTGAAGAGGTTTCTGAGGAGTTGACAATTCATCAAGCAAGCAAATCTTGTGAACAAGATTTATTACAAATTAACAAATGTACTGTTGTTGAGGAATCAGCAATTAAATTACTTGCCATGAGGGTCCTCACAACAGTTGAATTGAGAAAGAAACTTCTCGGGAAGAGATTCTCTTCTGATGCAGTGGAGGCAGTGATAAACAAATTCCTCAGCAACCTTTGCCTGGAATCATCAGGATCAAGGCAAGGTGAAGGCACTAAGGTTGTGCGCACACTTGTCTTTGTTATCCACTTACTTCCTATCATCATGAAGCGAGGAGATAGTGATGAGGATCAAAAGTCAAGTATTGGCTTATCAAAGCTTTCCATTGATCACTTATATGATCAGGCTTCAAAGCAGTGGATCCGAAGCCATGATGTACCCAAAGAAACAAGGAAATCGAGGGTTATTCGATGGCTACAATACCGTGGCTTTGACTGGAATGTCATCAACATCAATTCTGCATGCCATTCTAGGTCCACTACAAGTTTCTTGAAGGACCAAACGTCAATTGTTTTGGATAGGGTTGAAGAAGTCATCGTTGGCACTTGGCAGAAAATGCTGTTCCAACAAAGGCAGACATTTCGCTTCATCAATTTGCTTCAAGAAATGATGTATCAGCAGAATACACAAATATTTGCCCGTCCGAATACAATGAAGCCTACTTTCTGTCACATTGAAGCTGAGAGAGAAAGTAGCAGGAACCACCACCACTAA 2139 0.3941 MDKLRHGQAVDIPNYDSKSYKSDVFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTCEKARDIDLVLDQAAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVCIQVVEHGLGHLPFTEKQVITPTVLNAVMCIVAYGASFSSLLLLVVLDVHDGLLFINFWLFMVKTDSFPSHESAESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHMVCKKFPRIKIVTSEIDFGLNEDFRVVPGMVGDCANLPLRLLLECAKSGESFSYLFIMSPCLSILSKRKNQCIEFNDGLREMRQERTKSVMLSYGCEQMEEVEEVSEELTIHQASKSCEQDLLQINKCTVVEESAIKLLAMRVLTTVELRKKLLGKRFSSDAVEAVINKFLSNLCLESSGSRQGEGTKVVRTLVFVIHLLPIIMKRGDSDEDQKSSIGLSKLSIDHLYDQASKQWIRSHDVPKETRKSRVIRWLQYRGFDWNVININSACHSRSTTSFLKDQTSIVLDRVEEVIVGTWQKMLFQQRQTFRFINLLQEMMYQQNTQIFARPNTMKPTFCHIEAERESSRNHHH 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1310 712 Pfam Uracil phosphoribosyltransferase 243 394 - -
Lele03g1310 712 Pfam Uracil phosphoribosyltransferase 144 199 - -
Lele03g1310 712 Gene3D - 1 129 IPR027417 -
Lele03g1310 712 PANTHER URIDINE KINASE 2 310 - -
Lele03g1310 712 CDD PRTases_typeI 258 373 IPR000836 -
Lele03g1310 712 FunFam Probable uracil phosphoribosyltransferase 230 397 - -
Lele03g1310 712 CDD UMPK 1 126 IPR000764 -
Lele03g1310 712 Gene3D - 130 221 IPR029057 -
Lele03g1310 712 Gene3D - 230 397 IPR029057 -
Lele03g1310 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 119 IPR027417 -
Lele03g1310 712 Gene3D - 492 533 IPR036388 -
Lele03g1310 712 SUPERFAMILY PRTase-like 129 390 IPR029057 -
Lele03g1310 712 Pfam Phosphoribulokinase / Uridine kinase family 3 114 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1310 Lele-ChrLele03 7883668 7891537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1310 1 390 PRT Gene Family AT4G26510 75.000 0.0 580