Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1298 ATGCAGAAAGTTCTCATTTACGGATTCGCCCCTTTTGTTTCTCTTAATTCCCTTGTTCATTTACCAATGGCTGCAACCCTAAATTTTACGCTCCCCGCCGTCAGCCCCGTCCGTTCCTCCTCTTCCAACGGCGCTGCCACTTCCTCCGCCAGTTTTCTTCCGCATCAATGTAAGGCTTCTATGAGGTCTTTTGCAACTGAGGCCGGATCTGCGGTGGTCGCGTCTCGGCAGCCTGCGAGTCTCTACCAGGTGCTTCGAGTCCGTCAGAACGCTTCGCCGAGGGAGATCAAGTCGGCTTACCGGAGTTTGGCTAAGATCTACCATCCTGATTCGGCTCTGCACCGATCGGAGTCTGATGACGACCAGGACTTCATCGAGATCCACAACGCCTACGCCACGCTCTCCGATCCTTCGGCGAGAGCGATCTACGATCTTTCTCTGATGGCAGTTCGTGGGAGGAGGCGCCCTGTGTCGGCGTCTTCGGTTCAAAATTCGTCTTCCGGGTTTTCCACAACCCGCCGATGGGAGACAGATCAATGCTGGTAG 546 0.5495 MQKVLIYGFAPFVSLNSLVHLPMAATLNFTLPAVSPVRSSSSNGAATSSASFLPHQCKASMRSFATEAGSAVVASRQPASLYQVLRVRQNASPREIKSAYRSLAKIYHPDSALHRSESDDDQDFIEIHNAYATLSDPSARAIYDLSLMAVRGRRRPVSASSVQNSSSGFSTTRRWETDQCW 181
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1298 181 MobiDBLite consensus disorder prediction 157 181 - -
Lele03g1298 181 Pfam DnaJ domain 81 144 IPR001623 -
Lele03g1298 181 ProSiteProfiles dnaJ domain profile. 80 147 IPR001623 -
Lele03g1298 181 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Lele03g1298 181 CDD DnaJ 82 136 IPR001623 -
Lele03g1298 181 Gene3D DnaJ domain 66 166 IPR036869 -
Lele03g1298 181 SUPERFAMILY Chaperone J-domain 79 159 IPR036869 -
Lele03g1298 181 SMART dnaj_3 79 139 IPR001623 -
Lele03g1298 181 MobiDBLite consensus disorder prediction 156 181 - -
Lele03g1298 181 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 30 181 - -
Lele03g1298 181 PRINTS DnaJ domain signature 82 100 IPR001623 -
Lele03g1298 181 PRINTS DnaJ domain signature 100 115 IPR001623 -
Lele03g1298 181 PRINTS DnaJ domain signature 119 139 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele03g1298 Lele-ChrLele03 7809170 7810690 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1298 82 144 C2H2 Transcription Factor Family AT1G74250 43.939 2.14e-09 53.9
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1298 03 7809170 7810690 Lele25g1420 25 10307304 10310737 CCT
Lele03g1298 03 7809170 7810690 Lele26g1448 26 10214712 10219788 CCT
Lele03g1298 03 7809170 7810690 Lele27g0667 27 14636736 14650022 CCT
Lele03g1298 03 7809170 7810690 Lele28g1433 28 10411931 10424195 CCT
Lele03g1298 03 7809170 7810690 Lele03g1298 03 7809170 7810690 ECH
Lele01g1283 01 7814677 7815156 Lele03g1298 03 7809170 7810690 hybridization
Lele02g1555 02 19562744 19563223 Lele03g1298 03 7809170 7810690 hybridization