Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1296 ATGACTGATTGGAAATTCACTGGTAGTCTCCCTCCCTTGTCAGATGAGGAATGGCAGCAAGAGTTTGAGAAATATAAGCAATCGCCTGAATACAAGCGAGTTAATAAGGGAATGAAGATTGAGGATTTCAAATTTATATATTGGATGGAGTATGCACATCGAATGTGGGGAAGGGCATTGGGGGTTATGTTTGCTTTGCCCTTCTCATATTTTCTCCGTAAGGGGTACATAACCTTACGGTTGGGACTCGGACTCTCTACTCTGTTTGCCCTTGGGGCTGGCCAGGGTTTAATTGGGTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCAGCATCTGAATATTCTCAGCCAAGGGTCAGCCCTTATCGCCTTGCTGCTCATCTTACTTCAGCATTTGCTATTTACTGTGGCCTCTTCTGGACTGCTTTGTCTGTTGTTATGCCTGAACCACCAGCTGAATCACTAGCATGGGTTCATGGGGCGGCTAAAGTGAAGAGACTTGCACTGCCTATAGGCTTACTTGTTGGTCTGACAGCTATTTCAGATGATATTTTTGAAATGAAACCTTCCATTCGGAACTTCTTTAAGAATACATCAACTGTACAGCTTGATCATCGCATCCTTGCAACAGCAACTCTGATTTCAATAGGTGCTTTATGGTGGTCAACTAGAAAGCTGGACATACATCCTGCCATCCGATCTCTGATCGGAAGCACTGTTGGGATGGCTGCTCTTCAGGTTGATAATAGGCCCTCGCTGTATTTTAGTTGTGGGCTGCTAGGCCGAATTTTTGTTGGTGGAAAAGTGGATGGCATAGGTTGGCTTCTGCTGTGAGAAAACTTGACACAACTTTGTGGGAAAGAGGATAAGCTTTTGATGGACTCTCTGAATGAAAGACCAGTTCAGGAGATCGAAAACGAGAATCCTCATATACCTAAAATATCTTCTCAGAAGTCAGAATCTACCATGAAAGCTGAACAAGGATCATGTTCTGGAGAATTCTATTGCACACATCAGAAAACACTAAGGAGTATTGTCTACGACAGTATAAAAATCGTGATTTTCTCAAATAGATTCAACTTGCTTTTGCCTCTTGGGCCTTTGGCAATTATTGTGGAGAGATTGACTAATCATCACGGTTGGGCATTCGCTCTGAGTTTGTTGGGTATAATGCCTTTGGCTGAGCGGCTTGGTTTTGCTACAGAGCAGCTGGCCTTTTACGCCGGAGACACTGTTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTGATCATCTCAATATATGCATTGAAAAGAGGAATGACACGAGTTGTCCAACTCTCTTTGTTGGGTTCAATTTTGTCTAACATGTTGTTGGTGCTTGGATGTGCATTTTTTTGTGGTGGGATTGTTTTTAATAAGAAGGAGCAGGTTTTTAACAAGGCTACTACTACAGTGAATGCCGGATTGTTATTGATGGCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACGCACCGAGGTCCATTTTGGGAGCTCGGAGTTGGCCCTTTCAAGATTCAGCAGCTGCATTATGCTCGTGGCTTATGCTGCATACCTATTTTTTCAGTTAAATAGTCAAAGAAGTCTATATCTCTCTTTGAATGAGGAGGAGGGGAATCATGGAAACTGCATAGAAGATGATGAATCTCCTGATATCTCTAAATGGGAATCAGTAATCTGGCTTTCAATTATGACTGCTTTGATATCAATTCTTTCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATTCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCATAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAGCTTGATATTTCCTTGGGAGTAGCAATAGGTTCATCCACACAGATATCTATGTTTGTGATACCGCTTTGCGTGATTATTGGGTGGATAATGGGGCATCCAATGGACTTAAACTTTCAACTTTTTGAGACGGCAACACTATTTCTAACTGTTATTGTGGTAGTTCTCTTGTTGCAGGAAGGGACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGTTATCTGATAGTAGCAGCAAGTTTTTTTGTACATTTAGATCCTTCTTACTAG 2163 0.4184 MTDWKFTGSLPPLSDEEWQQEFEKYKQSPEYKRVNKGMKIEDFKFIYWMEYAHRMWGRALGVMFALPFSYFLRKGYITLRLGLGLSTLFALGAGQGLIGWWMVKSGLEEPASEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVHGAAKVKRLALPIGLLVGLTAISDDIFEMKPSIRNFFKNTSTVQLDHRILATATLISIGALWWSTRKLDIHPAIRSLIGSTVGMAALQVDNRPSLYFSCGLLGRIFVGGKVDGIGWLLLXENLTQLCGKEDKLLMDSLNERPVQEIENENPHIPKISSQKSESTMKAEQGSCSGEFYCTHQKTLRSIVYDSIKIVIFSNRFNLLLPLGPLAIIVERLTNHHGWAFALSLLGIMPLAERLGFATEQLAFYAGDTVGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFCGGIVFNKKEQVFNKATTTVNAGLLLMAVMGLLFPAVLHYTRTEVHFGSSELALSRFSSCIMLVAYAAYLFFQLNSQRSLYLSLNEEEGNHGNCIEDDESPDISKWESVIWLSIMTALISILSEYLVGAIEGASTSWKIPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPLCVIIGWIMGHPMDLNFQLFETATLFLTVIVVVLLLQEGTSNYFKGLMLILCYLIVAASFFVHLDPSY 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1296 720 FunFam Vacuolar cation/proton exchanger 558 714 - -
Lele03g1296 720 TIGRFAM caca2: calcium/proton exchanger 349 713 - -
Lele03g1296 720 Pfam Sodium/calcium exchanger protein 571 710 IPR004837 GO:0016020|GO:0055085
Lele03g1296 720 Pfam Sodium/calcium exchanger protein 381 536 IPR004837 GO:0016020|GO:0055085
Lele03g1296 720 TIGRFAM cax: calcium/proton exchanger 364 713 IPR004798 GO:0006816|GO:0015369
Lele03g1296 720 Gene3D - 556 714 IPR044880 -
Lele03g1296 720 Gene3D - 408 549 IPR044880 -
Lele03g1296 720 FunFam Vacuolar cation/proton exchanger 410 549 - -
Lele03g1296 720 Pfam Cytochrome oxidase assembly protein 1 247 IPR003780 GO:0006784|GO:0016020|GO:0016653
Lele03g1296 720 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 318 717 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1296 Lele-ChrLele03 7791082 7800704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1296 285 718 Antiporters AT1G55730 70.507 0.0 602