Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1294 ATGGGTCGTCTTCCTTGCTGCGAGAAGGACAACGTTAAAAGAGGACAGTGGACACCTGAGGAAGATAACAAGCTCTCTTCCTACATTGCTCAACATGGCACCAGGAATTGGCGCCTCATTCCTAAGAATGCTGGCCTTCAGAGGTGTGGCAAGAGCTGCAGGCTAAGGTGGACTAACTACCTTCGTCCTGATCTCAAGCATGGTCAGTTTTCAGACGCAGAAGAGCAAACCATTGTGAAGCTTCACTCCGTCTTTGGTAACCGATGGTCGCTAATAGCAGCACAGCTGCCGGGCCGCACCGACAATGATGTCAAGAATCACTGGAACACCAAGCTGAAGAAGAAACTTTCAAGCATGGGGATCGACCCGGTCACCCACAAGGCATTCTCCCAACTGATGGCCGAAATTGCGACAACATTGGCACCCCCACAGGCAGCTCACCTAGCTGAAGCAGCTCTGGGCTGCTTTAAAGATGAGGTGCTTCATCTTCTTACTAAGAAGAAGATTAACTTCCAGGCTCAACACCACCCTACTGAACAAATAGGGAATAACATTACCTCTTTCATGAACTATAATAAACCTGATGACAAGGAAGACACTTGTGCGAAGATTAAGTCTGGGTTATCAAACGCCATGCAAGAACCTGAAATGATAACCTCAAATAAACATTGGGACTGCACCGCAGCTACAACTGCTAGTTTTGAGGGCACTTGCAGTGTCTTCCCTACAGTGACTGGGTTTCAATTTAGTCCGGTGCCGTTCACCAATGAAGGGGATAGATCACCGTGGAGCCAAGGTGTGTGTACCGGAAGTACATGCACAGCCATGGATCATCAACAAGGCAAGTTACATAAAAAGCTTCAGGAAGAAAATGGAGATGATTCTAATACTGAAAAAGAAATTAGAAATGGATCCAATTTATTCAACACGCAGTGTGTTTTGTGGGATTTACCGTCAGAAGATCTAATTAATCCCATGGTATAA 984 0.4614 MGRLPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDAEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSSMGIDPVTHKAFSQLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKKINFQAQHHPTEQIGNNITSFMNYNKPDDKEDTCAKIKSGLSNAMQEPEMITSNKHWDCTAATTASFEGTCSVFPTVTGFQFSPVPFTNEGDRSPWSQGVCTGSTCTAMDHQQGKLHKKLQEENGDDSNTEKEIRNGSNLFNTQCVLWDLPSEDLINPMV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1294 327 MobiDBLite consensus disorder prediction 279 301 - -
Lele03g1294 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele03g1294 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele03g1294 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele03g1294 327 CDD SANT 70 112 IPR001005 -
Lele03g1294 327 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Lele03g1294 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele03g1294 327 CDD SANT 17 61 IPR001005 -
Lele03g1294 327 MobiDBLite consensus disorder prediction 279 300 - -
Lele03g1294 327 SMART sant 13 63 IPR001005 -
Lele03g1294 327 SMART sant 66 114 IPR001005 -
Lele03g1294 327 FunFam transcription factor MYB80 69 129 - -
Lele03g1294 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele03g1294 327 FunFam Transcription factor RAX3 7 67 - -
Lele03g1294 327 Gene3D - 68 131 - -
Lele03g1294 327 PANTHER F14D16.11-RELATED 1 323 - -
Lele03g1294 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele03g1294 327 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1294 Lele-ChrLele03 7775286 7777196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1294 1 327 MYB Transcription Factor Family AT5G56110 53.687 9.29e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele03g1294 Myb_DNA-binding 1.7e-15 CL0123