Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1269 ATGAAGAAAACCCCAGAACGCCATTTGGTTCTTTCAAGACAAAGTAGTAATCAGAATGCAGGCAATGATACAAACAAGCACAATCAAAGGACTCGTTCTTCTCTAAAGTCTTTCAAATCTTTTGTCAAGAAATTCACAGTCGGTTTTGCAATCTTTGGCTCTGGCGAGAGAAAATCAGCTTCAGAAGTTGCAGGAACTGATATCAGAAGGAATAGAAGTAGAGTCAGATTGGTATCATCATTTTCAACTGATGTATCATCTGAGAGTAACAACAAGAACTCATCATGGAAGTTTTCTAATTCCTACTCATCTTCAAGCGCCACAAGTGGACAACTTGGAATGGGGAACTTCTCGTTTGAAGATCTTTACAAGGCAACAGGAAAATTCTCTGCAAATCAAATAATAGGGCATGGTGGGTTTGGAACTGTGTATAAAGGGCAGCTCAATGATGGTTCTCTTGTTGCCATAAAGCGCTCCAAGAAGACTTCGCATGACAAGAACTTAGCTGAGTTCAAGAATGAAATAAATACACTGTCAAAAATTGAGCATCTGAATCTTGTGAGATTATACGGATATTTGGAGCATGAAGATGAAAAGATGATTGTTGTTAAATATGTTGGCAATGGGACACTTCGAGAACATCTGAACGGTACAAGGGGAAATGGACTCGAAATTGGCGAGCGTTTAGACATTGCAATTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCGTCCAATAATCCATAGGAACATCAAGTCATCCAATATCTTACTCACAGAAAAATTGAGGGCTAAAGTTGCAGACTTTGGATTTGCTCGTTTGGCTAATGATGATCCTGCAGCAACCCATATCTCAACTCAAATAAAAGGAACAGCTGGTTACTTAGATCCTGAGTACCTCCGAACTTATCAACTGACCGACAAGAGCGATGTTTATTCGTTCGGCGTATTGCTCGTAGAAATGATGACAGGGAGACATCCATTAGAACCAAAGAAACCTCTCTGTGAGCGAGTGACAATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATTGCCATGGATCCAAGGCTGTGGAGAAGTCCAGCTTCAACCATGGCAATGGAGAAGGTTATGAAGCTCGCCTTACAATGTCTTGCGTCATTGAGGCACTCGCGACCTTCCATGAAGAATTGTGCTGAGGTTCTTTGGGGAATCCGAAAAGAGTTGAGAGATCAAGCTTTGGCTCATGTTCGTCCTCTTGCTTCTCACCATTCTGCAGATTTCGCTAAAGTTGACAACGATAAGGACTTGATTTTGAGATCGGAAATGGCGGGGAAAGTGGAGGTGAATGGCGGCGGCGCTTCTTCTGCTTCTGCTGTTTCTGCCAAACTTCCGGCGGTGGCCAACCCATTGGCTGAAAAACCTGATGAGATTGCGTCCGACATCAATTACCACGCGCAGTATAGCACTCATTTCACCCCTTTCAAGTTTGAGCTGGAGCAGGCTTACTTCGCCACTGCTGAGAGTGTTCGCGATCGTCTCATTCGACAATGGAATGAAACGTTCCTCCATTTTCACAAAGTTGATCCCAAGCAAACATATTACTTATCAATGGAGTATCTTCAAGGTCGAGCTTTGACTAACGCAGTTGGGAACCTGAATATACAAGAAGCATATGCTGATGCTTTGCTCAAATTTGGACTCAAACTTGAAGAAATAACAGAGCAGGAGAAAGATGCAGCTTTAGGAAATGGTGGTCTGGGCAGGCTTGCTTCTTGCTTTCTGGATTCCATGGCAACACTAAATTTGCCTGCTTGGGGTTATGGTCTGAGGTATAGATATGGGCTATTTAAGCAGATAATTACCAAGGAAGCCCAGGAGGAACTTGCAGAGGACTGGCTTGAGAAGTTTAGCCCCTGGGAAGTTGCAAGGCATGACATTTCGTACCCTGTCAGATTCTTTGGCCACGTTCAGGTTAATCCTAATGGAAGCCGAAAATGGTTTGGAGGAGAGGTTGTGCAAGCGTTGGCATATGATGTGCCAATTCCAGGATACCAAACCAAGAATACCATCAGTCTTCGCCTTTGGGAAGCAAAAGCTTGTGCTGAGGATTTCAATTTGTTTTTATTTAATGATGGACAACATGAATCTGCTTCTGTTCTTCATTCACGAGCTCAACAGATTTGTGCGGTCTTGTATCCTGGGGATGCTACAGAAGATGGGAAACTTCTTAGGCTGAAGCAGCAATTCTTTCTCTGCAGTGCATCACTCCAGGACATAATTGTTCGGTTTAAAGAGAGGAGACAAGGAAAGGAATCTTGGACATGGTCTGAGTTTCCTAGCAAGGTTGCTGTGCAACTTAATGATACTCATCCTACCCTTGCAATTCCAGAGCTAATGCGACTACTTATGGATGATGAAGGGCTTGGATGGGATGAAGCATGGGATGTGACAACGAGGACAATTGCTTACACTAACCACACTGTCCTCCCTGAGGCACTGGAAAAATGGTCTCAACCTGTAATGTGGAAACTACTTCCTCGCCATATGGAAATCATAGAAGAAATAGACAAGAGGTTCATTGCATTTATAAGTGCAACAAGGTTGGACTTGGAGAGTAAGCTTCCTGCCATGCGCATTATGGACAATAATCCCCAGAAGCCAGTAGTTCGGATGGCAAATTTATGTGTGGTGTCCTCACATGCTGTGAATGGTGTTGCCCAGTTGCACAGTGACATTCTAAAATCAGAATTATTTGCGGATTATGTTTCAATATGGCCAAAGAAGTTCCAAAATAAAACCAATGGCATCACACCTCGAAGATGGCTCCGTTTTTGTAGTCCTGAGCTCAGTAAGATAATCACCAAGTGGTTAAAAACTGATCAATGGGTAACCAATCTTGATTTACTGACAGGTCTTCGACAGTTTGCGGGCAACGAAGAACTGCAAGCTGAATGGCTGTCTGCAAAGAGAGCTAACAAGCAACGCTTGGCACAGTATGTTCTACAGGTGACAGGGGTGAGCATTGATCCGGATAGTCTGTTTGACATACAAGTCAAGCGCATCCATGAATACAAAAGACAGCTACTGAACATTCTGGGTGCGATTTATAGATACAAGAAGTTAAAGGAGATGAACCCTGAAGAAAGGGAAAAAACAACTCCACGCACTGTGATGATTGGAGGGAAAGCTTTTGCTACATATACAAATGCTAAAAGAATAGTAAGGCTGGTTAATGATGTTGGCGCTGTAGTCAACACTGATCCTGAGGTCAATAACTACTTGAAGGTTGTGTTCGTCCCAAATTACAATGTGTCTGTGGCGGAGGTGCTGATTCCAGGAAGTGAGCTGTCCCAGCACATCAGCACAGCAGGCATGGAAGCAAGTGGCACAAGCAACATGAAATTTGCATTAAATGGGTGCCTCATAATAGGTACTTTAGATGGAGCTAATGTTGAGATTAGGGAGGAAATTGGGGAGGGAAACTTTTTCCTCTTTGGCGCAACAGCAGAAGATGTCCCTCGTCTCAGAAAGGAAAGAGAAAATGGACTGTTCAAACCAGACCCTCGGTTTGAAGAGGCAAAGAAGTTCATTAGGAGTGGGGTATTTGGAAGCTTTGACTATAACCCACTGCTTGAGTCGTTGGAAGGAAATTCTGGTTATGGTCGTGGTGACTATTTTCTTGTAGGCCATGACTTCCCCAGCTACATGGATGCTCAGGCAAGGGTAGATGCTGCTTATAGGGATAGGAAAAGATGGCTAAAGATGTCCATTTTAAGCACAGCTGGGAGTGGAAAATTTAGCAGCGACAGGACCATTGCTCAGTATGCCAAGGAAATTTGGAACATAGAAGAGTGCCGCGTTCCTTAA 3870 0.4349 MKKTPERHLVLSRQSSNQNAGNDTNKHNQRTRSSLKSFKSFVKKFTVGFAIFGSGERKSASEVAGTDIRRNRSRVRLVSSFSTDVSSESNNKNSSWKFSNSYSSSSATSGQLGMGNFSFEDLYKATGKFSANQIIGHGGFGTVYKGQLNDGSLVAIKRSKKTSHDKNLAEFKNEINTLSKIEHLNLVRLYGYLEHEDEKMIVVKYVGNGTLREHLNGTRGNGLEIGERLDIAIDVAHAITYLHMYTDRPIIHRNIKSSNILLTEKLRAKVADFGFARLANDDPAATHISTQIKGTAGYLDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPLEPKKPLCERVTIRWAMQMLKQGDAVIAMDPRLWRSPASTMAMEKVMKLALQCLASLRHSRPSMKNCAEVLWGIRKELRDQALAHVRPLASHHSADFAKVDNDKDLILRSEMAGKVEVNGGGASSASAVSAKLPAVANPLAEKPDEIASDINYHAQYSTHFTPFKFELEQAYFATAESVRDRLIRQWNETFLHFHKVDPKQTYYLSMEYLQGRALTNAVGNLNIQEAYADALLKFGLKLEEITEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQIITKEAQEELAEDWLEKFSPWEVARHDISYPVRFFGHVQVNPNGSRKWFGGEVVQALAYDVPIPGYQTKNTISLRLWEAKACAEDFNLFLFNDGQHESASVLHSRAQQICAVLYPGDATEDGKLLRLKQQFFLCSASLQDIIVRFKERRQGKESWTWSEFPSKVAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWDVTTRTIAYTNHTVLPEALEKWSQPVMWKLLPRHMEIIEEIDKRFIAFISATRLDLESKLPAMRIMDNNPQKPVVRMANLCVVSSHAVNGVAQLHSDILKSELFADYVSIWPKKFQNKTNGITPRRWLRFCSPELSKIITKWLKTDQWVTNLDLLTGLRQFAGNEELQAEWLSAKRANKQRLAQYVLQVTGVSIDPDSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMNPEEREKTTPRTVMIGGKAFATYTNAKRIVRLVNDVGAVVNTDPEVNNYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEGNFFLFGATAEDVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSFDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDAAYRDRKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECRVP 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1269 1289 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Lele03g1269 1289 CDD GT35_Glycogen_Phosphorylase 481 1283 - -
Lele03g1269 1289 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 475 1287 - -
Lele03g1269 1289 FunFam Alpha-1,4 glucan phosphorylase 942 1268 - -
Lele03g1269 1289 MobiDBLite consensus disorder prediction 1 33 - -
Lele03g1269 1289 FunFam Alpha-glucan phosphorylase 2, cytosolic 463 941 - -
Lele03g1269 1289 Gene3D Transferase(Phosphotransferase) domain 1 206 422 - -
Lele03g1269 1289 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 1127 1139 IPR035090 -
Lele03g1269 1289 ProSiteProfiles Protein kinase domain profile. 129 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1269 1289 Pfam Protein tyrosine and serine/threonine kinase 131 402 IPR001245 GO:0004672|GO:0006468
Lele03g1269 1289 MobiDBLite consensus disorder prediction 10 28 - -
Lele03g1269 1289 Pfam Carbohydrate phosphorylase 565 1283 IPR000811 GO:0005975|GO:0008184
Lele03g1269 1289 Gene3D Glycogen Phosphorylase B; 937 1268 - -
Lele03g1269 1289 SUPERFAMILY Protein kinase-like (PK-like) 102 405 IPR011009 -
Lele03g1269 1289 Gene3D Glycogen Phosphorylase B; 505 1284 - -
Lele03g1269 1289 Gene3D Phosphorylase Kinase; domain 1 88 205 - -
Lele03g1269 1289 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 476 1283 IPR011833 GO:0004645|GO:0005975|GO:0030170
Lele03g1269 1289 PANTHER GLYCOGEN PHOSPHORYLASE 460 1287 IPR000811 GO:0005975|GO:0008184
Lele03g1269 1289 FunFam receptor-like protein kinase FERONIA 87 205 - -
Lele03g1269 1289 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1269 Lele-ChrLele03 7590734 7602464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1269 456 1289 Glycosyltransferase AT3G46970 82.374 0.0 1467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele03g1269 Phosphorylase 1.9e-299 CL0113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1269 03 7590734 7602464 Lele03g1269 03 7590734 7602464 ECH
Lele01g1257 01 7623292 7635616 Lele03g1269 03 7590734 7602464 hybridization
Lele02g1526 02 19355892 19367250 Lele03g1269 03 7590734 7602464 hybridization