Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1255 ATGGCAACCTTTGTTGGTTTCTTGGCTAAGTTCGTTTCTCTTCTCATCCTCTTTGTTCACCTTGGCTGCTTCATTTTCTCCACCACCGGCGGCGGCTCCGGCGGTGAAGGGGGCCAGCAAGGTGCCCGGAAGTCTTCGTCAAAGAAACGCAAGGTTTCCCCTGTTTTGCAGTCGCAGCATTCTTCTCCTTCCCATCCCAAGTTCAAAACCCGTAAGGCTATTTCTTCTTCTTGGACTTTCATCAAGCACCTTTTCTCCCACAAATCTTGCAAAACCAGTGACGTTATTCAGGGATCGCCGCAATCCTCCGCCTCCACCGCTATTTCCGCTGGTTCCGCCGTCTCCGCCGCACTGCCTTCTTTGACATCAACTAGATCCTCCCAGCAGTCGTTGGTCTCTCTGGCGCAAGCCGAATCGCATGCGCTGGATCCTCCCGGGAAAAAACCATGCGTGTCATACCCTGAATCCGATATCGCCGCCGACAACAGCCACTTCTTCCCCCTCCGCAATGACATCTTCCCCTGCACCGTCTGCGGCGAGGTTTTCCAGAAACCACAAATTCTCGAACAGCATCAATCGCTGAAACACGCCGTGTCGGAGCTGATGGAGACCGACGCTGGTCATAACATAGTGCGGATAATATTCAAGTCGGGTTGGACCACCCCGCAGAAATGCCCCAGAATAAGTCGGATCCTGAAGATCCATAACAGCCCGAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGATGGTGAAGGCCAAGGCCGCCCGAAACGGCGCCGTAAAGGAGCGCGACGAAAGATGCATAGCCGACGGCAACGAGCTTATGAGATTCCACTGTTCCACATTCCTCTGCGACTTAGGACTCAACGGGAATTCCGGCATTTGTGGCCAACAATATTGTAATATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGCTGGACGGAATCTCCACGCTATCGACGAGCTGGAGGGCGCATGTGGCCATCCCAGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTATGCCGGGTCGTAGCCGGTCGGATCGGGACTGACTCGGACGAAGCCGACAAGGAGGACGGGGGTTTTGATTCGGTGATGGCGCGAGGAGGAAACGGAATCTACTCCCGGCTGGACGAAGAGGAGCTATTGGTGTTCAATCCCAGAGCTGTGCTTCCATGCTTTGTCATTGTGTATAGCGTGTGA 1233 0.541 MATFVGFLAKFVSLLILFVHLGCFIFSTTGGGSGGEGGQQGARKSSSKKRKVSPVLQSQHSSPSHPKFKTRKAISSSWTFIKHLFSHKSCKTSDVIQGSPQSSASTAISAGSAVSAALPSLTSTRSSQQSLVSLAQAESHALDPPGKKPCVSYPESDIAADNSHFFPLRNDIFPCTVCGEVFQKPQILEQHQSLKHAVSELMETDAGHNIVRIIFKSGWTTPQKCPRISRILKIHNSPKILSKFEEYREMVKAKAARNGAVKERDERCIADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVVAGRIGTDSDEADKEDGGFDSVMARGGNGIYSRLDEEELLVFNPRAVLPCFVIVYSV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1255 410 MobiDBLite consensus disorder prediction 31 70 - -
Lele03g1255 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 173 201 IPR013087 -
Lele03g1255 410 SUPERFAMILY ADP-ribosylation 198 409 - -
Lele03g1255 410 Gene3D - 196 409 - -
Lele03g1255 410 ProSitePatterns Zinc finger C2H2 type domain signature. 175 196 IPR013087 -
Lele03g1255 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 76 408 - -
Lele03g1255 410 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1255 Lele-ChrLele03 7484467 7485699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1255 78 410 C2H2 Transcription Factor Family AT2G29660 54.519 1.66e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele03g1255 None None None