Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1252 ATGGGCGATGATGAAGTGAATGAAAGACAGTTGGAGGGATGGGGTTTGAGGTTTGAGGAAGACAAGCAGAAAATGATGGCATATTCACGTGAAGAGTACAGTAACAGTGACGTCGACATCGAAGCGAGTTTCATCGATGAGTTCATAGCAAATAACGAAGTTCATCAGATGATGATCCCTACAGTTCTGGAGAAGAAAGCTCCTGGTAATTCTTCAACGGTGGTAGGGAAGAGAATCAATAAGAAAGGATCTTCTTCTTCTTCTGCGTCGTTGATCAAAGGACAGTGGACTGATGAAGAAGACAAGAAACTGGTGAAGCTGGTGAATGAATATGGAGTGAGGAAATGGGCACAGATAGCTGAGAATTTGGAGGGAAGAGCTGGGAAGCAATGCAGAGAAAGATGGCATAATCATCTACGTCCTGATATTAAGAAGGATAGTTGGAGTGATGAAGAAGAGAAAATATTGGTAGAAACACATGCAAAGGTAGGGAATAGGTGGGCAGAGATAGCAAAGAGAATTCCAGGCAGAACAGAGAATGCAATCAAGAACCATTGGAATGCCACCAAAAGGAGACAGAACTCCAAGAGAAACCACAAATCTTCAAACAAAACCTCCAACAACAACAACAATGGAAGAAAGCCTCCTTCTTCCATTCTCCAAGATTACATCAAAAGGAAGAATCTCTCCAATAATAACAATGGAAATGACCACCTTCTTCATGGCCCACCTCATGATGAAAACCAATTGATCAACCTTGTGATTTCTGATCATCACCATCAAGATCCCTCTCACGATGAACCTGTGATGGCTGAAGCATTTGATGATGAGCTTCTCTTCATGCAACAGTTCTTCCCGGAGAATTATCAGAACCAGCAGGTTCAGTTTCAGTCCAGTTTGGATTCTTATCGAACAGATGGCGGGCATGAGGGTCATCTTCCTCAACAGAGTGTTACTGCTACTATTGCTGCTCCCATGAAACAACAACACCATCATCATTCTGATATGTTTCTGGCTCAGTTATTGAATGGGGTTGGTTATAATTCATCCATTTTCTGTTGTGATTGTGGAAAAGAACAAAATTTTAACATGGGTTTGCAGGTAGGGGATGATCATCAGCAAGCTTGGGATGAAGAAGCAAAGAGAGAGATGGATTTGATGGAATTGGTTTCCTCTCAGCTTTCAAGTAGCCCCAGCAATAGGATCTTCTAG 1212 0.4216 MGDDEVNERQLEGWGLRFEEDKQKMMAYSREEYSNSDVDIEASFIDEFIANNEVHQMMIPTVLEKKAPGNSSTVVGKRINKKGSSSSSASLIKGQWTDEEDKKLVKLVNEYGVRKWAQIAENLEGRAGKQCRERWHNHLRPDIKKDSWSDEEEKILVETHAKVGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRNHKSSNKTSNNNNNGRKPPSSILQDYIKRKNLSNNNNGNDHLLHGPPHDENQLINLVISDHHHQDPSHDEPVMAEAFDDELLFMQQFFPENYQNQQVQFQSSLDSYRTDGGHEGHLPQQSVTATIAAPMKQQHHHHSDMFLAQLLNGVGYNSSIFCCDCGKEQNFNMGLQVGDDHQQAWDEEAKREMDLMELVSSQLSSSPSNRIF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1252 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 143 IPR017930 -
Lele03g1252 403 MobiDBLite consensus disorder prediction 200 218 - -
Lele03g1252 403 CDD SANT 96 139 IPR001005 -
Lele03g1252 403 PANTHER MYB PROTEIN-RELATED 84 214 - -
Lele03g1252 403 ProSiteProfiles Myb-like domain profile. 88 139 IPR001005 -
Lele03g1252 403 Gene3D - 92 144 - -
Lele03g1252 403 CDD SANT 147 190 IPR001005 -
Lele03g1252 403 ProSiteProfiles Myb-like domain profile. 140 190 IPR001005 -
Lele03g1252 403 SUPERFAMILY Homeodomain-like 90 186 IPR009057 -
Lele03g1252 403 MobiDBLite consensus disorder prediction 73 89 - -
Lele03g1252 403 FunFam Transcriptional activator Myb isoform A 92 145 - -
Lele03g1252 403 MobiDBLite consensus disorder prediction 69 89 - -
Lele03g1252 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 194 IPR017930 -
Lele03g1252 403 MobiDBLite consensus disorder prediction 176 218 - -
Lele03g1252 403 SMART sant 92 141 IPR001005 -
Lele03g1252 403 SMART sant 144 192 IPR001005 -
Lele03g1252 403 Gene3D - 146 217 - -
Lele03g1252 403 Pfam Myb-like DNA-binding domain 96 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1252 Lele-ChrLele03 7468332 7472933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1252 87 397 MYB Transcription Factor Family AT5G58850 44.012 4.77e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele03g1252 Myb_DNA-bind_6 1.1e-19 CL0123