Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1249 ATGCCGACCATTGCCGGGCGTAAGCTCGCCAAGGAAGCTCTCTCTGAGAGAATGGCCATCGTGCCGGAGAAGACTGCTTCCGATGCCCGATCTGAAGCCAATTCCACTCCTCGTAAGAGGAAATTGAGATCCGATGGGCCGCTGATTATGGACAGTCCAATATCTTCGCCGACCAAATGGAAGTCGCCTCGCCTGTGTAGCAGTGAGAGCCCAAGTCGCGCTGTCCCCGCGAATGAGATGGTTACTAATGAAGGTGAAATCAAATCGCATAAATCGCCGTCTAAGTCAATGCAGGATGGTTTTGCTGATAAACCGAAATGGAATCCTAAAGATGGTGAGCAAGTAAGTAGAGTGAAGGAGGCATTGCACGTGTCTACGGCACCATCTACAAGTGTCTGCCGTGAAGACGAGCAGAATATGGTTTTCGAGTTCTGTAAGTCATGCATTGAACATAAGAAGGCTGGAAGTATGTACATATGTGGGTGTCCTGGTACTGGAAAGTCGCTATCCATGGAGAAAGTAAAAGAGCTTTTAGTCGATTGGGCTAGACAGGCTGGCTTCCTTCTTCCCGATGTCTTGTCTGTGAACTGTACATCACTTGCTAATACATCTGACGTTTTCAGCAAGATACTTGAATTAAACCAACCACGGGGAAAAAAGGCTTCAGGTTCTCCCTTACAACAACTTCAGAGCCTGTACTCTCAAAAGTCATCTAGCCAGAACATGAAATTGATAGTGCTTGACGAGTTAGATTATCTAATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCTGATCGTTTTCTTCCAAGGTTGAAATCATTGAACTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGGCCAGATCCTTCGCATTCTGAAAGAAAGGCTAAGGGAACTTCCTTACACTGTATTCCAACATCAAGCACTAGAGCTCTGTGCTAGGAAAGTTGCTGCCGCTTCTGGAGACATGCGAAAAGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTGGAGGCAGAAATTAGAGAATCTCTTGGCCTTTCAGAAATTTCATTGGAAGAGAAGACTTCCCCTCAACAAAACATAGCTTCTGACCTCTATCATGTAAAAAAGCAAGAATTTGATGTTGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAGACTTATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCATCGATGAAACGTTTCCGTGGAGCAAAGAAAGATACAATCCTTGGCGAGTTGTACAAATCTTACGCGGGCATATGCAAATCATCACTGATTCCTCCTGCTGGAATTTTGGAATTTTCAAATATGTGCAGAGTATTGAGTGATCAGGGGCTTATCAAACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACGCTAAAAATAGATGAAGCTGATATTACCTTTGCATTGCAGGGAATCCGTTTCTTTAAAAGCTGTCTTCAATAA 1578 0.436 MPTIAGRKLAKEALSERMAIVPEKTASDARSEANSTPRKRKLRSDGPLIMDSPISSPTKWKSPRLCSSESPSRAVPANEMVTNEGEIKSHKSPSKSMQDGFADKPKWNPKDGEQVSRVKEALHVSTAPSTSVCREDEQNMVFEFCKSCIEHKKAGSMYICGCPGTGKSLSMEKVKELLVDWARQAGFLLPDVLSVNCTSLANTSDVFSKILELNQPRGKKASGSPLQQLQSLYSQKSSSQNMKLIVLDELDYLITKDRAVLHDLFMLTTFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKGQILRILKERLRELPYTVFQHQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESLGLSEISLEEKTSPQQNIASDLYHVKKQEFDVVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKRFRGAKKDTILGELYKSYAGICKSSLIPPAGILEFSNMCRVLSDQGLIKLGPSREDKLKRVTLKIDEADITFALQGIRFFKSCLQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1249 525 CDD Cdc6_C 428 510 IPR015163 -
Lele03g1249 525 PIRSF Cdc6 5 525 IPR016314 GO:0006270|GO:0051301
Lele03g1249 525 MobiDBLite consensus disorder prediction 19 111 - -
Lele03g1249 525 FunFam Cell division control protein 112 297 - -
Lele03g1249 525 SMART Cdc6_C_2 435 514 IPR015163 -
Lele03g1249 525 Gene3D - 111 298 IPR027417 -
Lele03g1249 525 Pfam AAA lid domain 331 366 IPR041083 -
Lele03g1249 525 Gene3D - 424 514 IPR036388 -
Lele03g1249 525 CDD AAA 137 298 - -
Lele03g1249 525 FunFam Cell division control protein 427 517 - -
Lele03g1249 525 Gene3D - 299 423 - -
Lele03g1249 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 371 IPR027417 -
Lele03g1249 525 MobiDBLite consensus disorder prediction 55 77 - -
Lele03g1249 525 Pfam AAA domain 152 268 IPR003593 -
Lele03g1249 525 SUPERFAMILY "Winged helix" DNA-binding domain 420 523 IPR036390 -
Lele03g1249 525 SMART AAA_5 153 300 IPR003593 -
Lele03g1249 525 FunFam Cell division control protein 298 424 - -
Lele03g1249 525 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 47 522 - -
Lele03g1249 525 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1249 Lele-ChrLele03 7446104 7451275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1249 1 524 Core DNA Replication Machinery Family AT2G29680 57.963 0.0 587