Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1246 ATGGAGGCTTCATGGGAGCAAAGTGTTACATACTCCCTCAACACTATCTTCCTCCTCTTCTCTGCCTACTTCGTCTTCGTCATGCAAATCGGCTTCGCCATGCTCTGTGCTGGCTCCGTCAGAGCTAAAAACGCCGTCAACATTATTCTCACTAATGTCGTCGACGCCGTCGTAGGAAGCATCTCTTTCTACCTCTTCGGCTTCGCATTTGCCTTTGGCGACGACTCCAATTCCAACCCTTTCATTGGCGCTGATCTATTTGCTTTCGTCAGCATTCCAAACGATTTTTCCTTGCCGGCTTTGTGTACCCAGTCGTGGCCCATTGGGTATGGTCTTCCGAGGGTTGGCTCAGTACTGGTTCGAGCAATCTGTTTCTACTGCGCTGGGAGTGGAGTGGTGCATATGGTAGGTGCAGTAGCGGGCTTTTGGGGTTCAGTCATACTAGGTCCACGGGTTGGCCGGTTTGATGCGTTCGGCAAGCCTGTACCGCTCCGAGGCCATAATGCGAGTCTAGTGGTGCTCGGAACGTTTCTTTTGTGGTTCGGATGGTTTGGGTTTAATCCCGGCTCATTCGATAAGATTTTGGTATCATATCCCGACACATCTAATGAGGAGGCGGCCCAATTGCATGGTGGGTGTGGGGCTTGGGGTTTGACATTCACCGGTTTGTTTGCCAAAGAGGAGTTTGTGATTCATGTCTATGATAAAGGCGTGACTGTAGTGGCTAGGCCCTATGGGCTTCTATTAGGAGGTGGATGGGCCTTGCTTGGAGCCCAAATTGTTGAATGTTACTATATTGGGCTGGGTTAG 810 0.5062 MEASWEQSVTYSLNTIFLLFSAYFVFVMQIGFAMLCAGSVRAKNAVNIILTNVVDAVVGSISFYLFGFAFAFGDDSNSNPFIGADLFAFVSIPNDFSLPALCTQSWPIGYGLPRVGSVLVRAICFYCAGSGVVHMVGAVAGFWGSVILGPRVGRFDAFGKPVPLRGHNASLVVLGTFLLWFGWFGFNPGSFDKILVSYPDTSNEEAAQLHGGCGAWGLTFTGLFAKEEFVIHVYDKGVTVVARPYGLLLGGGWALLGAQIVECYYIGLG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1246 269 SUPERFAMILY Ammonium transporter 11 266 - -
Lele03g1246 269 Pfam Ammonium Transporter Family 127 194 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele03g1246 269 Pfam Ammonium Transporter Family 17 95 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele03g1246 269 Pfam Ammonium Transporter Family 205 263 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele03g1246 269 Gene3D Ammonium transporter AmtB like domains 2 105 IPR029020 -
Lele03g1246 269 Gene3D Ammonium transporter AmtB like domains 119 200 IPR029020 -
Lele03g1246 269 Gene3D Ammonium transporter AmtB like domains 201 268 IPR029020 -
Lele03g1246 269 PANTHER AMMONIUM TRANSPORTER 10 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1246 Lele-ChrLele03 7433978 7435265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1246 205 266 Inorganic Solute Cotransporters AT4G13510 54.839 1.97e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1246 03 7433978 7435265 Lele03g1246 03 7433978 7435265 ECH
Lele02g1504 02 19195593 19197125 Lele03g1246 03 7433978 7435265 hybridization