Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1234 ATGTCTTCACGTCGATCTATTTCGAGATTAACAAGGTACCTTGTTCACGGGACCACGCGCTTTACCCTTCTTCTCCACCGCCTCTCGTTTTGCTATAACTACAAATTCCCATTCTTTTATTCTTTTTACTGTTCCCATCGTGCTCTCCCCTCTGTTTCTCCTTCTTCAACCTTCAACTTCTCTCTCAATGAAGAAGAAGAAACGTGCAACTCACCAATGACAAATCTACCCTCATCACATGTTCCGATTCCTTTTTCCATCTTCGCCTCCACCATCATCTTCTTCTTCCTTTCTCTGCTGTTACCGACCGCCGTCAACAGCCTCGGCTCTGCATCAACCACTGCTGTAGTCTATGGAACCGGTACCTTCTGCGGCATTGTCGCTAGCGAGCCCACCCAGAGGATCCTATGCTATCAAAACGGTCAGAGTATTCAAGTTCTTCCCAATGTCTCATTTCAAGCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGTCTCTTCTCTGGCGGATTCACCCTCCTTTGCTGGGACACTACATATTCATACTTTCCCTTTCAGCCTAGACGCTTGTATTACAGCGCCACCGTCTCATTGACTGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGAGCGTTGAACAATGGTATTGTCAGATGCTGGAGAGGAAAAGACGGAAATGGACATGAGTTTCCTTCTCCTAATGAGGACCTTCATTTTCGTGGGGTCACATCTGGATGTGGGTTTTCTTGTGGGATTCTGAAGGGAAACAACAGTGTTCATTGTTGGGGTCAGAGACAAAGTAATGGGGATGAGATTCAGAGACAGTTTAGGAATCTCTCAATGTCAAGCCTAGTTGCAGGAGAATCCCATGTTTGTGGTTTGACCATTAATGGAGTTTTGGTCTGTAAAGGAAGCAATAAAGCTGGGCAATTGAATGTTCCTCTCAGTTCACCTTCAGAATTCTCAAGTCTCGCATTAGGATCGAACTTCACTTGTGCTATTAGAAGCAAAAATGGTCTGGTAATGTGCTGGGGAAGAATCAACATGTCTGAGATTGAGAGTGACATGATTCAGAATGTTTCATTCGAGTCAATTGTTGCTGGTTCGGATTATGTTTGTGGGTTAATGACAGGGAATTTGTCTGTGATCTGCTCGGGCCCATGTTGGTCTAGAAGGCTTAATAATAACAACTCACATACAACAGATCTTCTTCTTCCTCTGGGAATGATAATCCCAGGTCCATGTGTTAAGGATTCTTGTAGCTCTTGTGGTACATATCCGAACTCCGAGGTTCTCTGTCATGGGTCTGCAAGAATATGCTATTCTTGCCAAACAGAGAATCCACTTGCAGTGCCATTACCAATCCCACCCCCGCCATCATCCCCATATTCACCAAATTCTTCAACCCCACAAAGAAACACAAGAACAAGAGAAAGGTTGATATTTCTGATTCTTGGATCAACTGGTGCTTTTGTTGGTCTCTGCTCGGTTCTTTTCTGCTTGTGGTTTGGAACATGTCGTTTATTATTATTGCAGAGAAAATCTGACAATGTAGTTCAAGCCACAACCACTGAAGCCGATGTGGATATTACTTTTCCTGCTACTGCTTCAACCACAGGTACAACCATGAGATCATTCTCCAGCAAACTACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGGTCATCCTCCATTGTAGTAGACAAGATGGAGACCTTCACGTTATCAGAACTCGCGACAGCCACAAACAACTTCTCGATTGAAAACAAAACAGGTTCCGGAAGCTTCGGCGCCGTGTACAGAGGCAAGCTAGAAGATGGACGTGAAGTAGCAATCAAAAGAGGAGAAACCTGCCCGAGAAAGAAGAAATTCCAAGAAAAAGAAAGCGCATTCGATTCAGAAGTGGCTTTATTATCGAGGCTTAATCACAAACACCTGGTGGCCCTCATTGGATTCTGCGAGGAAAACGACGAGAAACTCCTAGTCTACGAATACATGACCAACGGATCACTCCACCACCACTTACACAACAATCTCAACACCGAAAAAACCAGCAGTGTCATAAATTCATGGCGAATGAGGATCAAAATCGCACTAGACGCAGCCAGAGGGATCGAGTATCTTCACAACTACGCAGTACCCTCGATAATTCACAGAGACATAAAGTCATCAAACATTCTGTTAGACTCAAATTGGAACGCGAGAGTCTCAGATTTCGGATTATCATTGATGGGAGATCAAGAACAGATACCAACGAAAGCTGTAGGAACAGTAGGGTACATAGATCCAGAGTACTACGTGATGAACGTTTTGACTACAAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACAGGGAAAAGAGCGGTGTTTAGGGACGACGAGGAAGGAGGGTCGAGTCCGGTGGGTGTGGTAGAATTTGCAGGACCGAGGATCGGAGGAGGAGAGCTATGGAGTGTGTTGGATTACAGAGTAGGAGAACCAGAGGTGAACGAAGTAGAAGCTTTGGAGATAATGGCGTATAGTGCGATGCATTGTGTGAATCTGGAGGCGAAAGAGAGACCGAGTGCGAGTGATATTGTGGCGAATCTGGAGGGAGCTTTGGCATTTGTTGAAGGAAGTCCTCGTAGTGTCTCCATTACAGCTTTCTCTTCCTCTGCTCCATTCGAATGA 2691 0.4508 MSSRRSISRLTRYLVHGTTRFTLLLHRLSFCYNYKFPFFYSFYCSHRALPSVSPSSTFNFSLNEEEETCNSPMTNLPSSHVPIPFSIFASTIIFFFLSLLLPTAVNSLGSASTTAVVYGTGTFCGIVASEPTQRILCYQNGQSIQVLPNVSFQAISGGRSFFCGLFSGGFTLLCWDTTYSYFPFQPRRLYYSATVSLTDLTVGDTQVCARALNNGIVRCWRGKDGNGHEFPSPNEDLHFRGVTSGCGFSCGILKGNNSVHCWGQRQSNGDEIQRQFRNLSMSSLVAGESHVCGLTINGVLVCKGSNKAGQLNVPLSSPSEFSSLALGSNFTCAIRSKNGLVMCWGRINMSEIESDMIQNVSFESIVAGSDYVCGLMTGNLSVICSGPCWSRRLNNNNSHTTDLLLPLGMIIPGPCVKDSCSSCGTYPNSEVLCHGSARICYSCQTENPLAVPLPIPPPPSSPYSPNSSTPQRNTRTRERLIFLILGSTGAFVGLCSVLFCLWFGTCRLLLLQRKSDNVVQATTTEADVDITFPATASTTGTTMRSFSSKLQNSRTLRSYRRSGSSSIVVDKMETFTLSELATATNNFSIENKTGSGSFGAVYRGKLEDGREVAIKRGETCPRKKKFQEKESAFDSEVALLSRLNHKHLVALIGFCEENDEKLLVYEYMTNGSLHHHLHNNLNTEKTSSVINSWRMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGDQEQIPTKAVGTVGYIDPEYYVMNVLTTKSDVYGLGVVMLELLTGKRAVFRDDEEGGSSPVGVVEFAGPRIGGGELWSVLDYRVGEPEVNEVEALEIMAYSAMHCVNLEAKERPSASDIVANLEGALAFVEGSPRSVSITAFSSSAPFE 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1234 896 Gene3D Phosphorylase Kinase; domain 1 547 667 - -
Lele03g1234 896 Pfam Protein kinase domain 588 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1234 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Lele03g1234 896 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 278 880 IPR044815 GO:0004674
Lele03g1234 896 SUPERFAMILY RCC1/BLIP-II 196 436 IPR009091 -
Lele03g1234 896 MobiDBLite consensus disorder prediction 454 473 - -
Lele03g1234 896 ProSiteProfiles Protein kinase domain profile. 587 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1234 896 CDD STKc_IRAK 594 872 - -
Lele03g1234 896 FunFam receptor-like protein kinase FERONIA 549 667 - -
Lele03g1234 896 SMART serkin_6 587 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1234 896 SUPERFAMILY Protein kinase-like (PK-like) 561 870 IPR011009 -
Lele03g1234 896 Gene3D Transferase(Phosphotransferase) domain 1 668 879 - -
Lele03g1234 896 Gene3D - 135 404 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1234 Lele-ChrLele03 7343646 7346336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1234 73 885 Receptor kinase-like Gene Family AT3G55950 51.794 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele03g1234 Pkinase 3.8e-45 CL0016