Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1224 ATGACTTCTTGGGTGAGAGGGAATTGTATCGGTAAGGGCGCGTTTGGTACCGTCACTGTTGGTATTGACAGATGGGACGGTCGGGTTTTTGCGGTGAAATCGGTGGATCTCAAGACGGGTCTTCTGGCTAAGGTTAAGGCTTTGGAGAATGAGATTTGGATTCTCCGGAGGGTGTCGCCGTCGCCTTACGTGGTGGAGTTACTCGGGGATGATTTCACGACGTCGTATCGGAATTTGCATATGGAGTATATGCCGGGTGGCACCCTCGCTGACTTGGCGTCTCGGAATGCTGACGTGGATGACGAGTTGGTCAGGTACTATACGTGGTGCCTGGTGAACGCGCTGAGGCACGTCCACTCGAAGGGCGTCGTGCACTGCGACGTCAAGGGGAGGAACGTTCTGTTGGGGCCTAACGGCTGCGTCGCCAAGCTCGCCGATTTCGGCTCAGCGATTGAGTTTTCTGGTGAAGAGTGCTCGGCAGCGGTTCTGCCACGGGGGAGCCCGCTTTGGATGGCTCCGGAGGTGATCCGGGGGGAGTATCAGGGACCAGAGTCCGACGTGTGGTCATTGGGATGCACGGTGATCGAGATGGTTAGCGGGAAACCGGCTTGGGAAGATCACGGCGGCGACACGCTGAGTCGAATCGGATACTCCGACGACTTACCCGAATTCCCAGGTCAATGTTCAGAGCTAGCTCGGGATTTCCTCGACAAGTGCCTGAGAAGAGAACCTAAACAGCGGTGGAGCTGCGATCAGCTGCTGCAGCACCCATTTTTGTCATCTGCGTCTCCCAATAAGCCGGTGGAGTGTTCTCCTCGTTGCATTCTTGACTGGAACATCTCAGAATTCACCGAAGAAGAGGAAATCGGGTTCGATAACAATGCTGAAACTTCAGCTAAGGAAAGAATCCGTAAATTAGCCACAACACTGAGGGCAGATTGGGAAACAGAAGGTTGGGTGGCGGTGAGAGGATCGACATCAGCCGCAGAAGCTACAGTAATGGAAACAGGGGGCGCTGGAAGGGGAAGTGGGGACGAAGCAGGGACAAATTCGGAATATCTGCATCGGGCGGGGGTAGAAGAGGAAATGAAAGGAGGGACAAGTCGGGAATATTTGGATAATGGAAGGAGGGCAAATCCGGGAAAGTGGGAATGGGATGATGGCAAGTGGCGGTTGGTGTGGCGGTGTGGTCACAGGGAAGGCAAGGAAAGAAGGAACTTAGCTGGTCGGAGCTGTGCAAATACGTATATGTCAGAAAATGTAGATATACATTTAGTGCTGAGGATAAAAGTAATGATAAGCATTATTCACAGCCTGTGTTGTAAATTATTCAGATCATGTTACCTAAATTCCTCACCATTAATAAATTCAACTATGTTATTTTCTCCAATTATTTATTTTCTAGCGTTTTCCCTTGAACATCTATGTGCCAAGAAAATGTGTTCCTTGAGTCCAACTCGAGTTATTCTGGCTTTGATGTAAGCAAAGAGGCAAAAAACAAGTGAAAGGGCAGATGTCCCATCTGGTGAAATAGTCGTTGTTGTTGCGGTGGTGCTGGTGTGTGGTATGAGCAAACTGAAGCATGATCGTGTTGTTCGCTAA 1602 0.5056 MTSWVRGNCIGKGAFGTVTVGIDRWDGRVFAVKSVDLKTGLLAKVKALENEIWILRRVSPSPYVVELLGDDFTTSYRNLHMEYMPGGTLADLASRNADVDDELVRYYTWCLVNALRHVHSKGVVHCDVKGRNVLLGPNGCVAKLADFGSAIEFSGEECSAAVLPRGSPLWMAPEVIRGEYQGPESDVWSLGCTVIEMVSGKPAWEDHGGDTLSRIGYSDDLPEFPGQCSELARDFLDKCLRREPKQRWSCDQLLQHPFLSSASPNKPVECSPRCILDWNISEFTEEEEIGFDNNAETSAKERIRKLATTLRADWETEGWVAVRGSTSAAEATVMETGGAGRGSGDEAGTNSEYLHRAGVEEEMKGGTSREYLDNGRRANPGKWEWDDGKWRLVWRCGHREGKERRNLAGRSCANTYMSENVDIHLVLRIKVMISIIHSLCCKLFRSCYLNSSPLINSTMLFSPIIYFLAFSLEHLCAKKMCSLSPTRVILALMXAKRQKTSERADVPSGEIVVVVAVVLVCGMSKLKHDRVVR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1224 533 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 325 - -
Lele03g1224 533 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Lele03g1224 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lele03g1224 533 CDD STKc_MAPKKK 3 259 - -
Lele03g1224 533 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele03g1224 533 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1224 533 Gene3D Transferase(Phosphotransferase) domain 1 2 322 - -
Lele03g1224 533 FunFam Serine threonine protein kinase putative 2 309 - -
Lele03g1224 533 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1224 533 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1224 Lele-ChrLele03 7228952 7231330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1224 4 341 MAP Kinase Kinase Kinase AT1G07150 57.391 1.36e-129 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele03g1224 Pkinase 4e-57 CL0016