Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1222 ATGGAGACCTCAGCACTTCCCTTCGTTATATATGTATTCATCGTGATGTCTGCTGATGACAATGGGGAAGGAGGTACCTTTTCCTTGTACTCTCTTCTTTGCCGGCATGCAAGGCTAAGCATGTTACCTAATCATCAGCCCAACGATGAGAGGTTGCACGCTTATGCCACGGAAGACTCTGTGGACACCTGTCAGTCTTCTCTTCTGAAGTTGTTCTTAGAAAAGCACCCAAGGTTCCAGAAAGGACTGCTGATATTTGTTCTGCTAGGAACCTTTCTTTCAGCAGTTTCAGGAGTTCAAGTTAAAATCAGTCATCTCCATGAAATGGGCCTTTTCTCCATTCAACATCATGGAACACATAGAGTTGCTTTCTTGTTTGCCCCAGTTGTTGCAGCATGGCTTTTCTGTATCAGTGGTATTGTTATATACAACATAATCCACTGGAACCCACAAATATATCAGGCACTCTCTCCTGTTTACATGTCAAGGTTCCTTAGGACCACAGGCATTGAAGGATGGCTCTCATTGTGGGGAGTGGTTCTTTCAATCACAGAAGCTGTGTTTTGGCCAGTGTTCATAGTGGCCCCTTTTGCAGCTGTTGTAGGAAGTCAAGAAGTAATTTCTGCTACTTTTTCCATCGTAAGCCAGTGTTGTGCATTGAATTGCTTTCCTCGGGTGAAGATTATTCATACTTCTAGCAGAATTTATCCTGAAATCAACTGGATATTGATGTGCCTTTGTCTGGCTGTCACTGTTGGTCTGAGGGATACAGACATGATTGGTCATGCATACGCATCTCTCGCCTTCAGACGGGACTCTGATTCACTGCCATGTATATTCATGGTGTTATTATTGGCATTTGGGAACGAGTCTCTTTCCTTCGTATTGAACGCCATTGCTGGGGCTTACAGTGAGAACCTTCCCGTCATATGCATTGTTGGGGGTCCGAATACCAACGATTTTGGAGTTAATAGAATTCTCCATCACACCATTGGGTTGCCTGATTTCAGCCAAGAACTCAGATGCTTCCAAACTGTGACATGTTATCAGGCCGTGGTAAACAATTTGGAAGATGCTCATGAACAAATTGACAGAGCAATTTCCACCGCTTTAAGAGAAAGCAAACCTGTCTACATTAGCATTAGCAGTAACTTGCCTGGAATCCCACATCCAACTTTTATCAGAGATCCTATTCCATTTTCTCTATCTCCCAAATTGAGCAACAAGATGGGGCTTGATGCAGCTGTTGAAGCAGCCGCATCTTTCCTGAACAAAATGGTGAAGCCAGTGATTGTGGGAGGGCCAAAACTCCAAGTGGCGAAAGCGTGTGAGGCCTTTGCTGAATTGGCGGATGCTTGTGGCTATCCAATTGCTTCAATGCCATCAGCAAAAGGACTAAAGCTGAAATTACCAAAAGGATGTGGGTATGAATTTCAAATGCAGTATGCCTCAATTGGGTGGTCTGTTGGGGCAACACTTGGATATGCACAGGCTGTACCAAATAAACGTGTGATTGCTTGCATTGGTGATGGGAGTTTTCAGGTGACTGCACAAGATGTGTCAACAATGATGAGGCAAAATCAAAAGTCCATCATCTTTCTAATAAACAATGGTGGATACACTATAGAAGTTCAAATCCATGATGGTCCTTATAATGTGATCAAGAACTGGAATTATACAGGCTTAGTGGATGCAATCCACAATGGGGAAGGAAATTGCTGGACGCAAAAGGCCTGCAATGAACAGGAGCTGATAGCAGCAATTGAAACAGCAACGGGTGAGAAGAAAGATTGTTTGTGCTTCATTGAAGTGATTGTTCACAAGGATGACACCAGCAAAGAACTTCTTGGGTGGGGCTCACGGTTGTGTGCTGCAAGTGGCCGCCCTCCAAATCCTCAATAA 1902 0.4395 METSALPFVIYVFIVMSADDNGEGGTFSLYSLLCRHARLSMLPNHQPNDERLHAYATEDSVDTCQSSLLKLFLEKHPRFQKGLLIFVLLGTFLSAVSGVQVKISHLHEMGLFSIQHHGTHRVAFLFAPVVAAWLFCISGIVIYNIIHWNPQIYQALSPVYMSRFLRTTGIEGWLSLWGVVLSITEAVFWPVFIVAPFAAVVGSQEVISATFSIVSQCCALNCFPRVKIIHTSSRIYPEINWILMCLCLAVTVGLRDTDMIGHAYASLAFRRDSDSLPCIFMVLLLAFGNESLSFVLNAIAGAYSENLPVICIVGGPNTNDFGVNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHEQIDRAISTALRESKPVYISISSNLPGIPHPTFIRDPIPFSLSPKLSNKMGLDAAVEAAASFLNKMVKPVIVGGPKLQVAKACEAFAELADACGYPIASMPSAKGLKLKLPKGCGYEFQMQYASIGWSVGATLGYAQAVPNKRVIACIGDGSFQVTAQDVSTMMRQNQKSIIFLINNGGYTIEVQIHDGPYNVIKNWNYTGLVDAIHNGEGNCWTQKACNEQELIAAIETATGEKKDCLCFIEVIVHKDDTSKELLGWGSRLCAASGRPPNPQ 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1222 633 Coils Coil 353 373 - -
Lele03g1222 633 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 285 397 IPR029061 -
Lele03g1222 633 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 295 387 IPR012001 GO:0030976
Lele03g1222 633 CDD TPP_PDC_IPDC 465 616 - -
Lele03g1222 633 Gene3D - 448 615 - -
Lele03g1222 633 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 466 622 IPR029061 -
Lele03g1222 633 PANTHER PYRUVATE DECARBOXYLASE 467 625 IPR012110 GO:0016831
Lele03g1222 633 FunFam Pyruvate decarboxylase isozyme 462 617 - -
Lele03g1222 633 Gene3D - 261 391 - -
Lele03g1222 633 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 481 603 IPR011766 GO:0003824|GO:0030976
Lele03g1222 633 SUPERFAMILY DHS-like NAD/FAD-binding domain 399 466 IPR029035 -
Lele03g1222 633 Pfam K+ potassium transporter 7 185 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1222 Lele-ChrLele03 7202778 7210372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1222 49 265 Inorganic Solute Cotransporters AT2G30070 51.155 4.30e-85 276