Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1219 ATGTCCACCACCCAACCTACTGACTCACACACCAATCCTCTCACGCAAATGCTTCAGAGCATCTTCTCCGACAACAGCAACATCATGCTCGCCGCCATCATTTCCCTCCTTCTTGTCATCCTCTTCGTCCTCCTCCTCCACCTCTACGCCAAATGGTTCCTAGCCCATGCTCACGCCCAAGCCCAAGCTCGTCGACGACGCCGCAGGCGTCGCACGGCCTCCGTCACCGTCTCCGAAGTCATTGGTCCCGCGCGATTTCACCACTTCCACAGCTTCAATCTACAGGACTCCCCCATTTCCAACTTCCCCACTAAAGGGCTGGATTCGGCATCCATTGCTGCGATTCCTGTATTCGTATACGAAGCAGAGTCCACAGCGGACGAAGAAGGTGATGATCGAGAGTTGGAATGCGTAATTTGCTTGAGCGTTTTTGAGGATGGAGAAACCGGCAGGAGCTTACCCAAGTGTGGTCACGCTTTCCATGTCGAGTGTATCGATATGTGGTTTGGCTCGCATTCGAATTGCCCAATCTGCAGGTCTCCGATTGTGGAGCGTGATTCTCAATTGTCGGGTTCCGTTCATGATCAGGGTGATTCCTCTGCTGTGCTTGAGATTGTAATCGATTTTCCGAGTTCTGAGATCAGCGAGAACGACCGTGGAACTGAGAGTATTATTAGTGCTAACAATGATAATGATAATAATGGAGGGGTAAGTAGTGACTCAGCTATTTCTATATCAGAAACTTCATCCTCATTGTTGGGTTGTTCATTGAAGAGGATGTTCAGTAAAGTTTTTCCTTCTTCCAATGTCAGTGATGAGTTAAGCACATGA 831 0.4922 MSTTQPTDSHTNPLTQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAQAQARRRRRRRRTASVTVSEVIGPARFHHFHSFNLQDSPISNFPTKGLDSASIAAIPVFVYEAESTADEEGDDRELECVICLSVFEDGETGRSLPKCGHAFHVECIDMWFGSHSNCPICRSPIVERDSQLSGSVHDQGDSSAVLEIVIDFPSSEISENDRGTESIISANNDNDNNGGVSSDSAISISETSSSLLGCSLKRMFSKVFPSSNVSDELST 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1219 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 183 IPR013083 -
Lele03g1219 276 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 20 185 IPR044675 -
Lele03g1219 276 MobiDBLite consensus disorder prediction 214 241 - -
Lele03g1219 276 SUPERFAMILY RING/U-box 120 185 - -
Lele03g1219 276 SMART ring_2 137 178 IPR001841 -
Lele03g1219 276 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Lele03g1219 276 Pfam Ring finger domain 136 179 IPR001841 -
Lele03g1219 276 CDD RING-H2_EL5_like 136 179 - -
Lele03g1219 276 FunFam RING-H2 finger protein ATL1 95 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1219 Lele-ChrLele03 7184993 7185823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1219 22 180 Rapid Response to Elicitors AT3G16720 40.252 5.65e-31 115