Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1215 ATGGGGCATAGCAGCACATGGGGGTTATGGTGGGGAGATTTGATTTTGAAGACTCTGAAATGGAGAAGAATACAACACCGAGTGCTACGCAAACAGGACCAAACACAGAACCAGCGCGCGTCGTCGTTTACCGATCGTGATTCAATGGAAGCCGGAAAATGCAGCAAAATCCGATGCATTGTCAGGCTGCGTCAGATGCTGCGACGGTGGCGCAACAAGGCGCACATGTCGTCGGCGTACGGCGTTCCGTCGGATGTCCCTCCTGGCCATGTGGCGGTCCGGGTCGGCAGAGACTGTCCCCGGAGGTATGTCGTGAAGGCCACCTATCTGAATCACCCCTTCTTCAAGAAGCTACTGAATCAGGTCGAGGAAGAGTATGGCTTTTGCAACACCGGACCGCTCTCTATCCCGTGCGACGAAGAAGCTTTCCAAGAGGTTCTCCGGTTTGTTTCGCGGTCGGACTCGGGCAAATCGGCCCGGTTCCGTAACCTCGACGAGTTTCACAGGTATTGCCATGAGGGTTTGAGGAACAACCGGGAAATCTGGCAAGAATGTCGACCGCTGCTTCATGGTTTTACTTCTGCTCAGTGA 591 0.5431 MGHSSTWGLWWGDLILKTLKWRRIQHRVLRKQDQTQNQRASSFTDRDSMEAGKCSKIRCIVRLRQMLRRWRNKAHMSSAYGVPSDVPPGHVAVRVGRDCPRRYVVKATYLNHPFFKKLLNQVEEEYGFCNTGPLSIPCDEEAFQEVLRFVSRSDSGKSARFRNLDEFHRYCHEGLRNNREIWQECRPLLHGFTSAQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1215 196 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 68 146 IPR003676 GO:0009733
Lele03g1215 196 Pfam Auxin responsive protein 62 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1215 Lele-ChrLele03 7162554 7165014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1215 52 193 Calmodulin-binding Proteins AT4G34750 50.000 1.44e-43 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1215 03 7162554 7165014 Lele03g1215 03 7162554 7165014 ECH
Lele01g1201 01 7195109 7195739 Lele03g1215 03 7162554 7165014 hybridization
Lele02g1470 02 18916880 18917326 Lele03g1215 03 7162554 7165014 hybridization