Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1214 ATGGACCGTCGCTGGCCGTGGAAGAAAAAATCAGATAAGACAGTGCTTGACAAAGCAGCTGCTGCCTTGGACTCTGCCGGTGCTGGTGCCACTGGTCAGGGCAGTCAGGATAATTACAAGAAGCCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGAATAGCTTGGAGGACCAAGTGAAGACATTTGAGGAAAATTTTCAGATACTGGAAGATGAGGTTAAAGAATTGAATGAAAAGCTGTCAGCGGCAAACTCAGAGATAACTTCCAAGGAAAGCTTAGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGGTGGGAAAAGGCAGAAGCGGAAGCTTTGGCGTTGAAGAATCATCTAGAATCTGTCACACTCTCAAAGCTCACCGCTGAGGATCGGGCATCGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCAGAAAATACAGGAAGTTGCTCTCACCAAAACCAGGCAATTAGATAAAATTAAGGGTGAGCTTGACGCAAAGATAGCTAACTTAGAACAAGAACTTCTTAGGTCCGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGCTAATCAAAATTAGCGAAGAGAAGGCTCAGGCTGAAGCTGATATTGAGCTTTTAAAGGGAAACATAGAATCATGTGAAAGGGAAATCAATTCACTGAAGTATGAACATCATGTTGTTTCTAAGGAGCTGGAAATTCGTAACGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAGGCAGTATGCAGAGGGTGTTAAAAAAATTGCAAAGTTAGAGGCTGAGTGCCAAAGATTACGAGGTCTGGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTAGCACAAATGAAGCTGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGACACTCGGAGGTCTTCTGTTAAGCCTGGCAGTCCTCATTTGCCCCCATCACCTGATTTCTCCCTAGAGAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTCAAAGAAGCTTTGGCAAAACGAAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTGCAAAGTTTGGAAGCACAACTCCAGCCAATTGACCAACATAAAGGATCTCCAAAATCCATCATCCAGATAACACATGAAAGTATTTATGGTCAAAATGCAAGCATTGCACCAAGCTTTACCTCCATGTCTGAAGATGAAAACGGTTATGTCGGAAAATGTGCCGAGTCATGGTCTACAACATCGATCTCAGAACTATCCCAATCCCAAAAAGAAAAGAATATAGAGAAATCAAGCATATCTGGGGCGACTAATAAGTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCCTGTCTACCAAATGATTCCAATGGCTCTATTTCAATGTCTTCAAGCAATACAACTGAAATTGTGATCAACCATGTATCAGAAGTCAGTACTTGCATTGATGGTTCCTCTGAAAAGCAGAATGATTTGAATCCATTACCCAATCAAGTGTCTTCTGGTGAAGTGTGGTCAGCCCCTGATGCCCAATCTGGTGTTAATTACTTGTCACCGACAGAGCTTAGATCAAGAATTTTGACGGTTTTTGAGTCCATGTCTAGCAATGCTGATATAGGAAATATCCTTGAAGATATTAAACATATTTTGGAAGGTGTACGTGATGCTTCCAACAACCATTCTGTTGAATGTGTACCCAAGGATGTCCATCCTTCCGATGCTACACGTGACAAACAAGTTAACCCAGAAGATGTTGGCTCACATCTTGAAAAGGAAATCATTTCATCGAAGCAAACAATAGAACACGTGCAGATGACCAGAGAGTTGGAAGCTGCAATTTCTCATATTCATGACTTTGTGCTGTTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGCTGATGGAGGAGTGAAGCTAGAGATTGAGGAATTTTCTCACACCTTTAATAAAGTCATATGCAATGAAGCAACTTTGCTGCAGTTTGTTTTGGATTTGTCATGTGTATTAGCTAAGGCAAGTGAATTCAGATTTAATGTCTTTGGCTATAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAGGTTGCTTTGCCAGAAAATAAGTTAGTTCAAAATAGTCCGTCAGGAGAAAGATATCCAAATAGCTGTTCCCATATGCGTAATCGTTGTGCTGATCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAATCGTACTTCACACCAATTCTCAGTTGATAAGTTTGAAGAATTAAAATTAGAGAAAGAGAAGACAGCAATGGATCTGGCAAGATGCACTGAAACTCTTGAATCAACAAGGTCTCAATTACAAGAGACTGAGCAACTTTTGGCAGAAGTGAAATCACAACTGGCTGCTTCTCAAAGATCAAACAGCTTATCTGAGACGCAGCTGAAATGTATGGCGGAGTCATACAGGACCCTTGAAACACGTGCGCAGGAGTTAGAAACCGAGCTGAATCTTCTGCAAGTTAAGACAGAAACTCTGGAGTGTGAACTTCAAGATGAAAAGAGCGATCGCAAAGATGCTGTGGCCAAGTACAAGGAACTAGAAGAGCAATTGCGAAGGCTAGTTCTGTTTCTCACTGCCCTGTCACTCTGTGTTAGCTATGAGAGCTCAGCAGCTGATAATGACCTGAAGACTAAGCAGGAGAGAGATTTGGCGGGTGCCGTGGAAAAGTTAGCCAAGTGTCAGGAAACAATATTTCTTCTTGGCAAGCAGCTGCAAACTCTACGCCCTCAAAGGGAGCAGGGTGGATCTCCTTACAGCGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACAGAGGAAGAGCCTACTATTAGTAACCCAAATTTGCAAGAGTTAGATGATATGGACAGTGCTAGTTCAGCATTTGTGCAAAGATTGGGTCCGGAGTCACCCTTTTATTTCTCCAACAGCCTTTGTCCATCTGACAATGAAGCAAACCTTGCCACCATATCTCCAGCAAAGAATCCAAAACATAGGTCTACTAAATCAACCTCCTCCTCTGTTTCTTCCGCCCCCACGCCTGAAAAACTCGCGCATGCGCGAGGATTTAGTAGATTCTTTTCATCAAAAGGGAAAAATGAGCGTTAA 3279 0.4236 MDRRWPWKKKSDKTVLDKAAAALDSAGAGATGQGSQDNYKKPNYVQISVESYSHLNSLEDQVKTFEENFQILEDEVKELNEKLSAANSEITSKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTRQLDKIKGELDAKIANLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYEHHVVSKELEIRNEEKNMSMRSAEAANRQYAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGDTRRSSVKPGSPHLPPSPDFSLENIQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQPIDQHKGSPKSIIQITHESIYGQNASIAPSFTSMSEDENGYVGKCAESWSTTSISELSQSQKEKNIEKSSISGATNKLELMDDFLEVEKLACLPNDSNGSISMSSSNTTEIVINHVSEVSTCIDGSSEKQNDLNPLPNQVSSGEVWSAPDAQSGVNYLSPTELRSRILTVFESMSSNADIGNILEDIKHILEGVRDASNNHSVECVPKDVHPSDATRDKQVNPEDVGSHLEKEIISSKQTIEHVQMTRELEAAISHIHDFVLFLGREAMSVHDISADGGVKLEIEEFSHTFNKVICNEATLLQFVLDLSCVLAKASEFRFNVFGYKGTEAETNSPDCIDKVALPENKLVQNSPSGERYPNSCSHMRNRCADPQVPDDGNLISTYESNRTSHQFSVDKFEELKLEKEKTAMDLARCTETLESTRSQLQETEQLLAEVKSQLAASQRSNSLSETQLKCMAESYRTLETRAQELETELNLLQVKTETLECELQDEKSDRKDAVAKYKELEEQLRRLVLFLTALSLCVSYESSAADNDLKTKQERDLAGAVEKLAKCQETIFLLGKQLQTLRPQREQGGSPYSERSSKVDEGLTEEEPTISNPNLQELDDMDSASSAFVQRLGPESPFYFSNSLCPSDNEANLATISPAKNPKHRSTKSTSSSVSSAPTPEKLAHARGFSRFFSSKGKNER 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1214 1092 Coils Coil 214 248 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 973 1009 - -
Lele03g1214 1092 Coils Coil 817 851 - -
Lele03g1214 1092 Pfam Filament-like plant protein, long coiled-coil 93 978 IPR008587 -
Lele03g1214 1092 Coils Coil 139 199 - -
Lele03g1214 1092 Coils Coil 348 375 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 612 632 - -
Lele03g1214 1092 Coils Coil 859 914 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 1042 1070 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 1042 1092 - -
Lele03g1214 1092 Coils Coil 253 290 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 610 632 - -
Lele03g1214 1092 MobiDBLite consensus disorder prediction 530 559 - -
Lele03g1214 1092 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1087 - -
Lele03g1214 1092 Coils Coil 55 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1214 Lele-ChrLele03 7145268 7149235 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0080 25 464926 469307 Lele03g1214 03 7145268 7149235 CCT
Lele26g0091 26 489035 493917 Lele03g1214 03 7145268 7149235 CCT
Lele27g2006 27 24243492 24248329 Lele03g1214 03 7145268 7149235 CCT
Lele28g0090 28 497956 509370 Lele03g1214 03 7145268 7149235 CCT
Lele03g1214 03 7145268 7149235 Lele03g1214 03 7145268 7149235 ECH
Lele01g1200 01 7178056 7182198 Lele03g1214 03 7145268 7149235 hybridization
Lele02g1469 02 18899628 18903594 Lele03g1214 03 7145268 7149235 hybridization