Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1210 ATGGCAAATAAGGAAGAGCAACCCGTCAAGTCAAGGTTCCGACGCATCTGCGTCTTCTGTGGTAGCAGCCCCGGCAAGAACCCCAGCTACCAGCTCGCCGCTATTCAACTCGCTAAACAACTCGTGGAGAGAAAGATTGATTTGGTTTACGGAGGAGGGAGCATCGGGTTGATGGGTCTCGTCTCTCAAGCCGTCTTCGACGGTGGTCGCCACGTGTTAGGAGTGATTCCCAAGAGTCTTATGCCAAGAGAGATCACCGGAGAAACAGTAGGCGAAGTTCGAGCCGTATCGGGGATGCACCAGCGTAAGGCCGAAATGGCTCGACAAGCCGATGCTTTTATCGCCCTCCCAGGAGGTTATGGTACTCTTGAAGAGCTATTGGAAGTGATAACCTGGGCTCAACTGGGAATTCACGATAAACCAGTGGGCTTGTTGAACGTAGATGGGTACTACAACTCATTGCTGTCATTCATAGATAAAGCTGTGGACGAAGGCTTCGTCACCCCTGCTGCCCGTCACATTATCGTCTCTGCCCAAACTGCCCAGGAACTCATGTGCAAGCTTGAGGAATACCAGCCCAAGCACCGTGGTGAGTTTGCCAAGCTTAGCTGGGAGATGGAACAGCACCTGGTTCACTCTCAAACCGCCATGTCCGACATTTATCGTTGA 669 0.5217 MANKEEQPVKSRFRRICVFCGSSPGKNPSYQLAAIQLAKQLVERKIDLVYGGGSIGLMGLVSQAVFDGGRHVLGVIPKSLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARHIIVSAQTAQELMCKLEEYQPKHRGEFAKLSWEMEQHLVHSQTAMSDIYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1210 222 SUPERFAMILY MCP/YpsA-like 12 191 - -
Lele03g1210 222 FunFam CASP-like protein 4 190 - -
Lele03g1210 222 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
Lele03g1210 222 PANTHER LOG FAMILY PROTEIN YJL055W 7 211 - -
Lele03g1210 222 Gene3D - 2 190 - -
Lele03g1210 222 TIGRFAM TIGR00730: TIGR00730 family protein 15 191 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1210 Lele-ChrLele03 7104574 7106047 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0077 25 447570 449707 Lele03g1210 03 7104574 7106047 CCT
Lele27g2009 27 24264510 24266171 Lele03g1210 03 7104574 7106047 CCT
Lele03g1210 03 7104574 7106047 Lele03g1210 03 7104574 7106047 ECH
Lele01g1195 01 7135105 7136609 Lele03g1210 03 7104574 7106047 hybridization
Lele02g1465 02 18856963 18858432 Lele03g1210 03 7104574 7106047 hybridization