Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1198 ATGTGCCATGGTGGTGATTTCACGGCCGGAAATGGAATCGGTGGAGAATCGATATACGGAGCGAAATTCCAAGATGAGAATTTTGTAAGGAAGCACACTGGACCTGGAATATTGTCGATGGCAAACGCAGGTCCTAACACCAACGGATCTCAGTTCTTCATTTGTACGGGGAAGACGGAGTGGCTGGATGGGAAGCACGTGGTATTTGGACAGGTGGTGGATGGCATGGATGTGGTGAAGGGCATTGAGAAGGGATCAGATAGGCGAAAAAGAGAGCGCCCAGGTTGTCGTAACCAGGCTTTGGGCGGACACTCAACTCGCATCGACTTCGCGAGATCCTACCACTCCTCATATCCCCTTTTACTGCCTGAAGGATCATACTTAGAGAAGAAGAATTAG 399 0.4962 MCHGGDFTAGNGIGGESIYGAKFQDENFVRKHTGPGILSMANAGPNTNGSQFFICTGKTEWLDGKHVVFGQVVDGMDVVKGIEKGSDRRKRERPGCRNQALGGHSTRIDFARSYHSSYPLLLPEGSYLEKKN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1198 132 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 94 IPR002130 GO:0000413|GO:0003755
Lele03g1198 132 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 89 - -
Lele03g1198 132 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 92 IPR002130 GO:0000413|GO:0003755
Lele03g1198 132 Gene3D - 1 98 IPR029000 -
Lele03g1198 132 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Lele03g1198 132 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Lele03g1198 132 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 IPR002130 GO:0000413|GO:0003755
Lele03g1198 132 SUPERFAMILY Cyclophilin-like 1 88 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1198 Lele-ChrLele03 7023608 7029839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1198 1 83 U-box Gene Family AT5G67530 51.190 4.90e-18 77.0