Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1151 ATGAAAGGTGGCAAATCGAAGGCTGAATCTAAGAAAGCCGATGCTAAGCTTGCTGTGAATAAGAAGGGCGCCGCCGCCACCAAGGCTGGCAGGAAACCAAGCAAGGGGAAGGCGGCGAAAGACCCTAACAAACCAAAGAGACCGGCCAGTGCCTTCTTTGTTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAATCCTGACAACAAAGCAGTGTCTGCTGTTGGCAAAGCTGCTGGGGCTAAATGGAAGTCCATGTCTGAAGCTGAGAAAGCGCCCTATGTAGCTAAAGCAGAGAAACGAAAGGCTGACTATGAGAAGAATATGAAAGCATATAACAAGAGACAGGCGGAAGGTCCAAATGCTGCAGATGAAGAAGAATCTGACAAATCAGTTTCTGAGGTGAATGATGATGAGGAAGGAGATGAAGAGGGCAGTGATGAGGAGGAAGATGATGAGTAG 465 0.4731 MKGGKSKAESKKADAKLAVNKKGAAATKAGRKPSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKAVSAVGKAAGAKWKSMSEAEKAPYVAKAEKRKADYEKNMKAYNKRQAEGPNAADEEESDKSVSEVNDDEEGDEEGSDEEEDDE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1151 154 Gene3D High mobility group box domain 28 130 IPR036910 -
Lele03g1151 154 MobiDBLite consensus disorder prediction 1 18 - -
Lele03g1151 154 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lele03g1151 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 149 IPR031061 -
Lele03g1151 154 MobiDBLite consensus disorder prediction 81 154 - -
Lele03g1151 154 MobiDBLite consensus disorder prediction 131 154 - -
Lele03g1151 154 SUPERFAMILY HMG-box 33 121 IPR036910 -
Lele03g1151 154 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lele03g1151 154 Coils Coil 96 116 - -
Lele03g1151 154 MobiDBLite consensus disorder prediction 1 49 - -
Lele03g1151 154 SMART hmgende2 44 115 IPR009071 -
Lele03g1151 154 CDD HMGB-UBF_HMG-box 45 111 - -
Lele03g1151 154 MobiDBLite consensus disorder prediction 94 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1151 Lele-ChrLele03 6748926 6750233 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lele03g1151 HMG_box 7.1e-24 CL0114