Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1144 ATGAATTTGCTTTGGGCTGTTTCTTGCGTGCTCGTGCTTTTCACAGTGCCTCCATATGTGATCAGTGGTAATCCGTCGAGACCCGCCGTCGTGCATATCGGCGCTCTCTTCACCTTTGATTCTACCATTGGCAAAGTCGCTAAAATCGCGTTGGAGGAAGCGGTGAAGGATGTAAACGCCAATGCTAGCGTACTCCCTGGAACTAAACTTGTCCTTACTGACCAAAATTCCAATTGCAGTGGTTTCTTGGGGATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTGGCAATCATAGGTCCACAATCTTCCGTTGTTGCTCACATAATATCTCATGTGGCAAATGAGCTTCAAGTCCCTCTGGTGTCATTTGCAGCGACGGACCCAACCCTATCCAACCTTCAGTTCCCTTTTTTTGTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGAAATTGTTGATTATTATGGTTGGAAGGAGGTCATTACTATTTTTATAGATGATGATTTTGGACGAAATGGCGTGTCAGCCTTGGATGATCAACTATCAGCTAGGCGCTGTAGAATCTCTTACAAGGCAGGAATTAGATCAGGGCCTGCAGTTGATCGGAGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTAATGCAATCTCGGGTCATTGTTCTTCATGTAAATCCTGATTCAGGATTTATGGTTTTCAATGTCGCACAATATCTTGGGATGACTGGGAATGGCTACGTATGGATAGCCACAGACTGGCTCTCCTCTGTTGTGGATTCTACTTCTCTCTCTTCAGATACAATGAGTGTTCTTCAGGGCGTTCTTGTTTTACGCCAACATACTCCTGATTCAGATGGAAAAAGAGCATTTCTGTCTAGGTGGAACAAGTTAACTGGAGGCTCTGTGGGGTTAAGTTCTTATGGCCTTCATGCATATGATACTGTTTGGCTGCTTGCACATGCTATTGATACATTCTTCAACCAGGGTGGGATTATATCATTTTCTAACGACTCCAGGATACATGATGTTGACGAAGGTAATCTTAACCTTGAGGCAATGAGCATTTTTGACAATGGAACGCTTCTCTTGAACAACATCTTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGAGTCAGACAGATCTCTTGTTCGTCCTGCATATGATATTATCAATGTGGTGGGAACTGGGATTCGTCAGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCCATTGTTCCTCCTGAGTCACTGTATGCTAAGCCTCCTAATCGCTCAAGTGCAAACCAACGACTTCATTCTGTAATATGGCCTGGAGAAACACTATCAAAACCCCGTGGATGGGTTTTTCCAAATAATGGAAAACAATTGAGAATTGGTGTACCTATCCGATTCGGTTACCGTGAATTTGTATCACCCATTCAAGGAACTGATATGTTTAAAGGTTTCTGCATTGATATATTCACGGCAGCTGTAAACTTGTTACCGTATGCTGTTCCATATCGCTTTGTCCCATTTGGAGATGGCCGTAAAAACCCAAACTACGATGAACTTGTCAAGTTGATCACCACAGGGTACTTTGATGGTGCTGTTGGTGACATTGCCATTGTCACAAACCGGACAAAGATTGTAGATTTTACACAGCCATATATTGAATCTGGACTTCTTGTGGTGGCTCCTTTTAAGAAAACAAACTCTGGTGGATGGTCTTTTCTGCGGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTCTTTCTTCTTTTTCATTGGCATAGTAGTATGGATTCTGGAGCATAGAATAAATGACGAGTTCAGGGGTCCACCTAGACAGCAAATTATAACCATTTTATGGTTTAGCTTGTCAACTCTATTCTTCGCACACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTAATCATATGGCTGTTTGTGGTTTTGATAATCAATTCCAGCTACACAGCAAGTTTGACATCAATCCTCACAGTGCAGCAATTATCTTCTACCATCAATGGAATAGATAGCTTAAAAGCTGGTGATGAACCTATAGGGTATCAAGTGGGTTCATTCGCAGAACATTATTTGGCTGTTGATATTGGAATATCCAAATCCAGGCTTGTTCCCCTTGGATCTCCTGAAGAATATGCCAAGGCTCTCCAGCTTGGTCCTGAAAATGGAGGTGTTGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTATCCACCCAATGCAGTTTCAGGATAGTAGGTCCGGAGTTCACCAGAAGCGGCTGGGGATTTGCATTCCCACGGGACTCCCCTCTGGCCATTGACTTGTCAACTGCAATTCTACAACTTTCTGAAAATGGTGAACTGCAGCGGATTTATGATAAGTGGCTCGTAGGAAGAGCCTGCAGTACGGATGATACTGAGATTGATTCAGATCGGCTTCGGTTTAAAAGCTTCTGGGGTCTCTTTCTTATATGTGGGATTGCTTGCGTTATCGCTCTTTGTATCTATTTTTTGCAGATTATGCTGCAGTTACGCCATTCTCCTCCTGCCGAACCAGCTTCTTCCAATGGAAGCTCATCGGTTTTGAGACATCTTCGAAGATTTATTTCACTGATCGACGAGAAGGAAGAACGGTCCAATAACAGCAGTAGAAAGAGGGTTGAAGCCCAAAGATCACCAGAGGAAGATGGATTGGGGAGGCAGCTAAAGAGGTTACAAACAGAAACAAGTCGAACAAGTTCTCAATTCAGTTTTAGAGTACAAAATGATCAGATATAA 2808 0.4316 MNLLWAVSCVLVLFTVPPYVISGNPSRPAVVHIGALFTFDSTIGKVAKIALEEAVKDVNANASVLPGTKLVLTDQNSNCSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELQVPLVSFAATDPTLSNLQFPFFVRTTMSDLYQMAAVAEIVDYYGWKEVITIFIDDDFGRNGVSALDDQLSARRCRISYKAGIRSGPAVDRSEITDLLVKVALMQSRVIVLHVNPDSGFMVFNVAQYLGMTGNGYVWIATDWLSSVVDSTSLSSDTMSVLQGVLVLRQHTPDSDGKRAFLSRWNKLTGGSVGLSSYGLHAYDTVWLLAHAIDTFFNQGGIISFSNDSRIHDVDEGNLNLEAMSIFDNGTLLLNNILQSNFVGLTGPVKFESDRSLVRPAYDIINVVGTGIRQVGYWSNYSGLSIVPPESLYAKPPNRSSANQRLHSVIWPGETLSKPRGWVFPNNGKQLRIGVPIRFGYREFVSPIQGTDMFKGFCIDIFTAAVNLLPYAVPYRFVPFGDGRKNPNYDELVKLITTGYFDGAVGDIAIVTNRTKIVDFTQPYIESGLLVVAPFKKTNSGGWSFLRPFTPLMWIVTASFFFFIGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVIIWLFVVLIINSSYTASLTSILTVQQLSSTINGIDSLKAGDEPIGYQVGSFAEHYLAVDIGISKSRLVPLGSPEEYAKALQLGPENGGVAAIVDERPYVEIFLSTQCSFRIVGPEFTRSGWGFAFPRDSPLAIDLSTAILQLSENGELQRIYDKWLVGRACSTDDTEIDSDRLRFKSFWGLFLICGIACVIALCIYFLQIMLQLRHSPPAEPASSNGSSSVLRHLRRFISLIDEKEERSNNSSRKRVEAQRSPEEDGLGRQLKRLQTETSRTSSQFSFRVQNDQI 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1144 935 Gene3D - 736 771 - -
Lele03g1144 935 MobiDBLite consensus disorder prediction 913 935 - -
Lele03g1144 935 SUPERFAMILY Periplasmic binding protein-like II 442 807 - -
Lele03g1144 935 FunFam Glutamate receptor 146 297 - -
Lele03g1144 935 Gene3D - 772 805 - -
Lele03g1144 935 FunFam Glutamate receptor 577 707 - -
Lele03g1144 935 Pfam Ligand-gated ion channel 807 839 IPR001320 GO:0015276|GO:0016020
Lele03g1144 935 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 885 - -
Lele03g1144 935 PRINTS Metabotropic glutamate GPCR signature 166 183 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele03g1144 935 PRINTS Metabotropic glutamate GPCR signature 99 125 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele03g1144 935 PRINTS Metabotropic glutamate GPCR signature 131 150 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele03g1144 935 PRINTS Metabotropic glutamate GPCR signature 150 166 IPR000337 GO:0004930|GO:0007186|GO:0016020
Lele03g1144 935 CDD GluR_Plant 464 806 - -
Lele03g1144 935 Gene3D - 146 419 - -
Lele03g1144 935 SMART GluR_14 467 808 IPR001320 GO:0015276|GO:0016020
Lele03g1144 935 MobiDBLite consensus disorder prediction 886 912 - -
Lele03g1144 935 Gene3D - 461 575 - -
Lele03g1144 935 MobiDBLite consensus disorder prediction 886 935 - -
Lele03g1144 935 FunFam Glutamate receptor 461 576 - -
Lele03g1144 935 Gene3D - 49 394 - -
Lele03g1144 935 CDD PBP1_GABAb_receptor_plant 32 423 IPR044440 -
Lele03g1144 935 Gene3D - 576 703 - -
Lele03g1144 935 Coils Coil 882 902 - -
Lele03g1144 935 PIRSF IGluLR_plant 1 934 IPR017103 -
Lele03g1144 935 SUPERFAMILY Periplasmic binding protein-like I 26 457 IPR028082 -
Lele03g1144 935 Pfam Receptor family ligand binding region 49 404 IPR001828 -
Lele03g1144 935 FunFam Glutamate receptor 703 810 - -
Lele03g1144 935 Pfam Bacterial extracellular solute-binding proteins, family 3 487 806 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1144 Lele-ChrLele03 6715354 6719158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1144 27 899 Ion Channels AT1G42540 66.100 0.0 1239