Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1124 ATGCCCAAGCAAACCCCCGGGGGAATATCGATCACCCACCTTGAGATGGTGAAGGAGACCGAATACTATGACGTGCTGGGAGTCAGTCCCACGGCAACTGAAGCCGAGATTAAGAAAGCTTATTACATGAAGGCACGACAAGTACATCCGGATAAAAACCGAAATGACCCTGACGCAGCACAAAAATTTCAGGTTTTGGGTGAGGCTTACCAAGTTTTGAGTGACCCAAATCAACGGCAAGCTTATGATACTCATGGAAAATCTGGAATCTCAACGGATGCCATTATTGATCCAGCAGCAATCTTTGCCATGCTTTTTGGCAGTGAGCTTTTTGAGGAGTACATAGGTCAATTAGCCATGGCATCAATGGCATCAATGGATATCTTTGTTGAAGGGGAACAATTTGATGCTAAAAAGTTACAAGAGAAAATGAGGGTTGTTCAGAAAGAGAGAGAAGAAAAGCTTGCAGAGATACTTAAAAATAGACTAAACCAGTATGTCCAAGGAAACAAATCTGAATTTACCAATCATGCAAATGATGAAGTTTCACGACTATCCAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATATGCGAGGCAGGCAGCAAAGGAGCTAGGGAAGAAAGCAATTTATTTAGGTGTGCCTTTCATTGCTGAGTGGTGTAGAAACAAAGGACACTTCATCAAATCCCAAGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTGCAGGAGGATATAAAGAAGCAGCTAAATCAACAAGGGAACTACACTGAAGAAGAGCTTGAAGAATACATGCAATCCCACAAGAAATTAATGATTGACTCGTTGTGGAAGCTTAATGTAGCTGACATTGAGGCTACCCTATCCCGTGTCTGTCAAATGGTTCTCCAAGACAATAGTGTCAAAAAAGAAGAACTCCGTGCCCGAGCTAAGGGATTGAAAACTCTTGGTAAAATCTTTCAGGGAGTTAAGTCATACGATGGAAATGAGAGTGAAAATGTACCAAATAAACCAGGAATACAAAAATTGAATGGTAGTGAACCAAGTGATGACTCTCGTTCTCCTGGTACATCTCAAAAAAGTTCAAATCCTGATTTTTCGTCACACACTGTCTCTGTGCCCCAGAGTCCCTATGTGGAGGCCCCTCAATTTGCAGGCTCTTACATGGACTATAACTTCCCTAGGCCAACAGCACCCCCTGGTGCCCAGAGACCTCCAATCAACAGGGATTGA 1254 0.4298 MPKQTPGGISITHLEMVKETEYYDVLGVSPTATEAEIKKAYYMKARQVHPDKNRNDPDAAQKFQVLGEAYQVLSDPNQRQAYDTHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFVEGEQFDAKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKSEFTNHANDEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWCRNKGHFIKSQVTAATGAIALIQLQEDIKKQLNQQGNYTEEELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNSVKKEELRARAKGLKTLGKIFQGVKSYDGNESENVPNKPGIQKLNGSEPSDDSRSPGTSQKSSNPDFSSHTVSVPQSPYVEAPQFAGSYMDYNFPRPTAPPGAQRPPINRD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1124 417 PRINTS DnaJ domain signature 41 56 IPR001623 -
Lele03g1124 417 PRINTS DnaJ domain signature 23 41 IPR001623 -
Lele03g1124 417 PRINTS DnaJ domain signature 58 78 IPR001623 -
Lele03g1124 417 PRINTS DnaJ domain signature 78 97 IPR001623 -
Lele03g1124 417 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 17 353 - -
Lele03g1124 417 Coils Coil 246 266 - -
Lele03g1124 417 CDD DnaJ 21 75 IPR001623 -
Lele03g1124 417 SUPERFAMILY Chaperone J-domain 15 116 IPR036869 -
Lele03g1124 417 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Lele03g1124 417 Gene3D DnaJ domain 11 98 IPR036869 -
Lele03g1124 417 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Lele03g1124 417 Coils Coil 137 157 - -
Lele03g1124 417 Pfam DnaJ domain 21 83 IPR001623 -
Lele03g1124 417 FunFam Chaperone protein dnaJ 10 16 98 - -
Lele03g1124 417 MobiDBLite consensus disorder prediction 332 417 - -
Lele03g1124 417 Pfam X-domain of DnaJ-containing 148 339 IPR026894 -
Lele03g1124 417 MobiDBLite consensus disorder prediction 333 384 - -
Lele03g1124 417 SMART dnaj_3 20 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1124 Lele-ChrLele03 6590242 6597845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1124 22 85 C2H2 Transcription Factor Family AT1G74250 42.029 3.93e-09 56.6