Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1115 ATGGAGGCTTCTGTTTTTGCCATTGACGCAACCGACACCACTAAAGGTGATAAAGGCCAAAATGGCGTTTTGCCAAGACACCTTCGTTTGAGCATGGAGTCTGTTCACCGGACACCTCAGTCAATGATTCTTCAGTTACAAAATGAACTGACTATAGGAAAGAAAGCATTGTATCTCAAGTTAGTTTCTAGGATTGCCTCTCTTTTCCTTCTCCTCTCTGATAATCAAATTCGTCAAATTGGACCTGGACTTCTCCTCAATTCTTCTTCCTCCAGAAAAGAGGACAAGGTTGAACAAGTGGCCCAACGTAGGATCCACAAGCCCAGGTGGCTTGAGCCTATTCTGAAGAAAACTTTCTTTGATTCTTGTGAAGCCCATCCTATGTACAAGAATGAACTGAACAAATACTGTATGACCTGCAACAAGTCTGCTTGCCAATATTGTGTGTCTCAGGGCATTCATCGATGCCACAAGATGCTTAACATTTATAAACATGTCTACAAATATGTTGTCGCCTTAGCTGCTGTTGAAAAGCATATTGACTGTTCAAAAATTCAGACCTACAAATGCAACAAGCGATTGGCTATTGCTCTGAATCCTCTTCCACATGGCGGTTTGGCATCAGATACTGAGCCATTATGTGAGATCTGTGCTAGAAAGCTGACTGACCCTTATTTGTTTCGTTACTGCGCCATTTCATGCAAGGTTCAAGCTGTTTTAAGGAAACCCAATGATTCACTTCCTCCCTTCATTACCATCCAGCGTCGTTCTAAGGGAAAGAAAGGGGAAGCTTCTGAGCCCCCGAAGCCTACCAACAAAAGAAAGGGAACACCCCGTAGGGCTCCCTTCTTCTGA 855 0.4351 MEASVFAIDATDTTKGDKGQNGVLPRHLRLSMESVHRTPQSMILQLQNELTIGKKALYLKLVSRIASLFLLLSDNQIRQIGPGLLLNSSSSRKEDKVEQVAQRRIHKPRWLEPILKKTFFDSCEAHPMYKNELNKYCMTCNKSACQYCVSQGIHRCHKMLNIYKHVYKYVVALAAVEKHIDCSKIQTYKCNKRLAIALNPLPHGGLASDTEPLCEICARKLTDPYLFRYCAISCKVQAVLRKPNDSLPPFITIQRRSKGKKGEASEPPKPTNKRKGTPRRAPFF 284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1115 284 ProSiteProfiles Zinc finger B-box type profile. 123 162 IPR000315 GO:0008270
Lele03g1115 284 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 101 283 - -
Lele03g1115 284 MobiDBLite consensus disorder prediction 256 273 - -
Lele03g1115 284 MobiDBLite consensus disorder prediction 1 23 - -
Lele03g1115 284 MobiDBLite consensus disorder prediction 249 284 - -
Lele03g1115 284 Pfam PLATZ transcription factor 164 236 IPR006734 -
Lele03g1115 284 CDD Bbox2 123 162 - -
Lele03g1115 284 SUPERFAMILY B-box zinc-binding domain 122 173 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele03g1115 Lele-ChrLele03 6523038 6526758 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele03g1115 PLATZ 6.4e-17 No_clan