Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1111 ATGAAAGCAAACTTTGATCTTGAAGTGGGGGCCTCCGAAGAAAGTGAATTTGAAGTCAGCAGCCAGGTTGCTTCCAATATATCCACTAAAGAAACTATTGCAGGTCCTTGTATTGATCAAAACCTGTCCAACTCTGCCACCCCAGGAAATCCAACAGAGATAATTGATGGAAATTCAAATCCCGTTTCACTTGACCTGACTCTCAACTCAAATAACAATGAGTTAGCAGGGTCAAAGGATTCCGTACGACTCTCACTCTCAAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACTACTGAAGCGACCATCACCAGAGTTTTCGCATGCAATTACTGTCAACGCAAGTTCTTCAGCTCGCAGGCTCTTGGGGGCCACCAAAATGCACACAAGAGAGAAAGATCATTGGCAAAGCATGCTATGAGGATGGGTATTTTCTCTGAGAGGTATGCAAATCTAGCATCTCTCCCTCTTCATGGTTCTTCGAGATCATTGGGAATAAAAGCTCACTCTTCACAGCATTATGGCTTTTCCCCAACAATGAAGGTTCAAGAGATGAAAAACAATGCAAAATATGAGATAAGATATATTGGTCAGCCAATTTTCTTGGAGGATAATCAACCTGGATTTGTTTGGCCTGGTAGTTTCCGTCAGAATGCAAACGTAGGTGATGATCGTAATAAGAATTTTCCGCCGACTGAAAGTCCTGGTTTGAGTTTTAGGGAGGTGAATCCACCAGTAGACGTAGAGAAGACCACCCCAGATTTGACATTAAAACTTTGA 786 0.4275 MKANFDLEVGASEESEFEVSSQVASNISTKETIAGPCIDQNLSNSATPGNPTEIIDGNSNPVSLDLTLNSNNNELAGSKDSVRLSLSSTSESSNEPASQTTEATITRVFACNYCQRKFFSSQALGGHQNAHKRERSLAKHAMRMGIFSERYANLASLPLHGSSRSLGIKAHSSQHYGFSPTMKVQEMKNNAKYEIRYIGQPIFLEDNQPGFVWPGSFRQNANVGDDRNKNFPPTESPGLSFREVNPPVDVEKTTPDLTLKL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1111 261 MobiDBLite consensus disorder prediction 80 101 - -
Lele03g1111 261 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Lele03g1111 261 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 56 193 IPR044246 GO:0009788
Lele03g1111 261 SUPERFAMILY beta-beta-alpha zinc fingers 107 136 IPR036236 -
Lele03g1111 261 MobiDBLite consensus disorder prediction 221 235 - -
Lele03g1111 261 Gene3D Classic Zinc Finger 86 155 - -
Lele03g1111 261 MobiDBLite consensus disorder prediction 217 261 - -
Lele03g1111 261 MobiDBLite consensus disorder prediction 39 58 - -
Lele03g1111 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1111 Lele-ChrLele03 6500979 6501764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1111 91 261 C2H2 Transcription Factor Family AT1G66140 45.226 7.20e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele03g1111 None None None