Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1085 ATGACACTAAAGGATGGTGGCACATGCCTGCTGTCACATCAGTCTGTAATGTACAATCCAGATTTTCCAGTACGGATGATCCAATGGCTAAGATTGGCTCTTGCCATTACTCTTACAGAGACGCTCTTCTCTTTCTCTCTCTACTGCACACAGGTCCAGCTTTGCTCGGTACCCCCTTATAAGAGGCAAAGATTACTACAAGATTCTGTATCTTTAAAAGAAAGGAAAAGAAAAGTGAAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGAGGAGGCGAGAAGAAATGTCTGAATTCCGAGCTATGGCATGCATGCGCGGGTCCTCTCGTGTCCCTACCAAATGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCACAGCGAGCAGGTTGCAGCCACAACTAACAGAGAACTTGATGGGCACATACCCAACTACCCAAGCTTGCCGCCCCAGTTAATTTGCCAACTTCATAATGTCACAATGCATGCTGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTGCAGCCATTGACTCCGCAAGAGCAGAAGGAAACATTTCTTCCTCTCGAATTGGGCATTCCGAGCAAACAGCCCTCGAATTATTTTTGCAAGACATTAACAGCAAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCACTGCAGCCACCGGCACAAGAACTAATTGCTAGGGACCTCCATGACGTTGAGTGGAAGTTCAGACATATTTTTCGTGGACAGCCAAAACGACACCTTCTTACAACAGGCTGGAGTGTATTTGTAAGTGCCAAGAGACTTGTGGCCGGAGATTCTGTGCTATTTATATGGAATGAAAAGAATCAGCTACTTTTAGGAATACGTCGTGCCAGTCGGCCCCAAACTGTGATGCCATCGTCGGTTCTTTCAACTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACCACTTTCAAAATATGTCAAGGCCGTGTACCATACACGTGTTTCAGTTGGCATGCGATTCAGGATGCTTTTTGAGACTGAGGAATCAAGTGTACGAAGGTACATGGGTACAATAACTGGCATAAGTGATCTGGATCCCGTTCGTTGGCCAAATTCTCATTGGCGGTCTGTCAAGGTTGGTTGGGATGAATCGACAGCAGGAGATAGGCAGCCACGGGTATCATTATGGGAAATCGAGCCTTTGACAACATTCCCGATGTATCCATCACTATTCCCCCTCAGATTGAAGCGACCATGGCATCCTGGTTCTTCATCTTTGCACGATGGAAGAGATGATGCAGGGCTGATGTGGCTGAGAGGTGGACTTGGAGATCAAGGTCTCAACTCCCTCAATTTTCAAGGCGGTGGTTTGTTGCCGTGGATGCAACCGAGACTAGATCCGACTTTGCTAGGAAGTGGCCATAATCAACAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACCCAGGGAGTGGAGATCTCTTGCGTCAACAAATGATGCATTTACAACAACCCTTCCATTATCTTCAACAACCGGGAAACCATAATTCTCTGCAGCTTCAGCAGCATCAAGCAATTCAGCAACCGATGAGTTCTAATATCCTTCAGCCACAAACTGTGGCAGAGAACTTGTCTCAGCACCTCCTTCAGAAACCACATAACAATCAAGAAGACCAAGCGCAGCCGCAGCCGCAGCAACCACAGAATAATTATCACGATGCATTTTTTGTTCAGGGCGATCAGCTCCCACAGAGGCTACACTCCCATGCTCCTTCGCCATCCTATTCAAAACCTGATTTCTTCGATTCGAGTGTAAAGTTCTCATCAGTTTCCCCTGGACAGAATATGCTTAGTTCACTTTGTCCTGAAGGGAGTAGCAATCTTTTCAGCCTACTGAGAAGCAGTCAGTCTACGCTGACTGAACAATTAGCTCAACAATCGTGGAGTCCAAAGTACGCTCCTGTGCAGGTGAGTGCTGCCTTTGGCAACTCAATGTCACACTCACAATATACCGAGAAAGATTCTGCGACGGTGCCATCACATTGTACTTCAGATGCCCAGAATCCTACTCTCTTCGGCGTTAATATTGATTCATCTGGACTTCTGCTTCCCACCATTGTCCCTGGGTTTTCAACTTCCTCAGTTGGTACTGATGCATCAACCATGCCATTAGGGGACTCTGGATTCCAGGGTTCTCTGTATAATTGTGTGCAAGATTCTGCAGAGTTGATTCAGAGTTCAGGGCAAGTTGACCCAGAAAACCAAGCTCAGACATTTGTCAAGGTCTACAAATCAGGTTCAGTTGGGCGCTCACTTGACATCTCTCGGTTCAGCAGCTATCATGAGCTGAGAGAGGAGTTGGCCCAAATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGACGACCCGTGGGAATCTTTCGTCAACAATGTTTGGTACATCAAGATACTCTCACCTGAGGACATTATGAAGATGGGTGAGCAATCGGTGGAATCGTCACTGGGTCCTAGCGCGGGACAAAGGATGAACAGCAGCACTGCGGATTCTCAGGACCTTTCTGGCTTTCCATCAATGGGCCCGCTTGAATACTGA 2781 0.47 MTLKDGGTCLLSHQSVMYNPDFPVRMIQWLRLALAITLTETLFSFSLYCTQVQLCSVPPYKRQRLLQDSVSLKERKRKVKLDMKLSTSGLGQQGQEGGGGEKKCLNSELWHACAGPLVSLPNAGTRVVYFPQGHSEQVAATTNRELDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSTDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGSSSLHDGRDDAGLMWLRGGLGDQGLNSLNFQGGGLLPWMQPRLDPTLLGSGHNQQYQAMLAAGLQNPGSGDLLRQQMMHLQQPFHYLQQPGNHNSLQLQQHQAIQQPMSSNILQPQTVAENLSQHLLQKPHNNQEDQAQPQPQQPQNNYHDAFFVQGDQLPQRLHSHAPSPSYSKPDFFDSSVKFSSVSPGQNMLSSLCPEGSSNLFSLLRSSQSTLTEQLAQQSWSPKYAPVQVSAAFGNSMSHSQYTEKDSATVPSHCTSDAQNPTLFGVNIDSSGLLLPTIVPGFSTSSVGTDASTMPLGDSGFQGSLYNCVQDSAELIQSSGQVDPENQAQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIMKMGEQSVESSLGPSAGQRMNSSTADSQDLSGFPSMGPLEY 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1085 926 ProSiteProfiles PB1 domain profile. 800 884 IPR000270 GO:0005515
Lele03g1085 926 SUPERFAMILY DNA-binding pseudobarrel domain 196 341 IPR015300 -
Lele03g1085 926 SMART B3_2 212 314 IPR003340 GO:0003677
Lele03g1085 926 Pfam B3 DNA binding domain 212 313 IPR003340 GO:0003677
Lele03g1085 926 FunFam Auxin response factor 210 314 - -
Lele03g1085 926 Pfam AUX/IAA family 796 886 IPR033389 -
Lele03g1085 926 SUPERFAMILY CAD & PB1 domains 796 874 - -
Lele03g1085 926 FunFam Auxin response factor 376 448 - -
Lele03g1085 926 CDD B3_DNA 211 312 IPR003340 GO:0003677
Lele03g1085 926 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 101 889 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele03g1085 926 Gene3D - 376 448 - -
Lele03g1085 926 Pfam Auxin response factor 338 421 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele03g1085 926 ProSiteProfiles B3 DNA-binding domain profile. 212 314 IPR003340 GO:0003677
Lele03g1085 926 Gene3D - 796 889 - -
Lele03g1085 926 Gene3D - 210 313 IPR015300 -
Lele03g1085 926 FunFam Auxin response factor 795 889 - -
Lele03g1085 926 MobiDBLite consensus disorder prediction 890 926 - -
Lele03g1085 926 MobiDBLite consensus disorder prediction 893 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1085 Lele-ChrLele03 6303831 6310668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1085 182 891 B3 DNA Binding Superfamily AT5G37020 69.071 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele03g1085 AUX_IAA 6.3e-08 CL0072