Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1060 ATGTCCCTGCACTCCGATCTCCATCTTGAACACCCAGAAACATGCACAACCACGACAAGAAGAAGAAACCATCAGAGGCTCCTCAGAATCATACTCGCTGATCACGACGCCACTGATTCTGACTCTGACTCTTCCTCCTATGGAAACCCGCAAAACTCATCAAGAGTCAAGCGCCACGTTACACAGATCACCCTCCATCTTCCCTCCCCCAATTCTCCTTCTTCCTCATCTCCTCCCCGCACTCCTTCCAAGTCCAACCCGACCCGATTCAGGCGGCCCGCTAGTGCCTCCGCCTCTCGCCGCCATAAAAAGTTCAGAGGCGTTCGCCAGAGGCCTTGGGGTCGCTGGGCAGCCGAGATCCGGGACCCGAACAGAAGAAAACGGGTCTGGCTTGGAACCTTCGACACGGCGGAGGAAGCCGCGTCTGAGTACGACAGGGCAGCACTGAAGCTCAAGGGTCCTAACGCGGTCACCAACTTCCCTAACTCCATCATTACGGAGGATACACCGACGCCGATGGCTGTCGTAGTTGAAAGTCCCAGTACTGAAGGAACGATCTCCTACTCCGATTCGGCGGCGTCACCCACATCTGTGCTTCCCTGCGACGGCGATTCGGCGGCGTTCGACGGTTTCCGTTACGGAGATGTGGACGCGTTCGGGTTCGACATAGATGTGCCGCTGAGTTTGCCGGACGTGAACTTGATGCTGTCAAGTCAACCGTTTGGGAAAGAGGAGTTCGGCGAGTTTGACCTCGATGATTTCTTGACTGTTGCGTGGCCTGTGAATTTTGACTTGGTACATATGTTTAAGCGGTAA 816 0.5515 MSLHSDLHLEHPETCTTTTRRRNHQRLLRIILADHDATDSDSDSSSYGNPQNSSRVKRHVTQITLHLPSPNSPSSSSPPRTPSKSNPTRFRRPASASASRRHKKFRGVRQRPWGRWAAEIRDPNRRKRVWLGTFDTAEEAASEYDRAALKLKGPNAVTNFPNSIITEDTPTPMAVVVESPSTEGTISYSDSAASPTSVLPCDGDSAAFDGFRYGDVDAFGFDIDVPLSLPDVNLMLSSQPFGKEEFGEFDLDDFLTVAWPVNFDLVHMFKR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1060 271 ProSiteProfiles AP2/ERF domain profile. 104 161 IPR001471 GO:0003700|GO:0006355
Lele03g1060 271 MobiDBLite consensus disorder prediction 78 93 - -
Lele03g1060 271 FunFam Ethylene-responsive transcription factor 2 103 162 - -
Lele03g1060 271 PIRSF PTI6 2 259 IPR017392 GO:0003700
Lele03g1060 271 MobiDBLite consensus disorder prediction 95 110 - -
Lele03g1060 271 PRINTS Ethylene responsive element binding protein signature 127 143 IPR001471 GO:0003700|GO:0006355
Lele03g1060 271 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Lele03g1060 271 SUPERFAMILY DNA-binding domain 104 163 IPR016177 GO:0003677
Lele03g1060 271 MobiDBLite consensus disorder prediction 42 71 - -
Lele03g1060 271 MobiDBLite consensus disorder prediction 1 22 - -
Lele03g1060 271 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 199 - -
Lele03g1060 271 MobiDBLite consensus disorder prediction 1 20 - -
Lele03g1060 271 MobiDBLite consensus disorder prediction 37 110 - -
Lele03g1060 271 SMART rav1_2 104 167 IPR001471 GO:0003700|GO:0006355
Lele03g1060 271 Pfam AP2 domain 104 153 IPR001471 GO:0003700|GO:0006355
Lele03g1060 271 Gene3D AP2/ERF domain 103 163 IPR036955 GO:0003700|GO:0006355
Lele03g1060 271 CDD AP2 103 163 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1060 Lele-ChrLele03 6135823 6137829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1060 19 199 AP2-EREBP Transcription Factor Family AT4G27950 44.444 1.07e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g1060 AP2 1.9e-16 CL0081