Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1051 ATGGGGTCCGAGGTTTGTGTCGGTGTTTCTGGTGTCTCCGCCACTGCTCATGAATGGAAGAAGGGGTGGCCTCTTCCATATGGTGGATTCGCCCAATTTTGTAACAACTGCGGGATTTTGACGGAATGCAAGCTTGACACCCTTGATTCCATGTCTGCCTATGAGGCATCCATTTTCTGTAGTAAATTCCACCGCGAAGAAACTGGTTGGAGGGATTGCGGCTTTTGCAACAAGCCCATCCACAGTGGATGCATAGTATCTAGGTCTTTGTTCGACTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTGGATCACGTTTGAACACCAAAGAACCAAATGGGGCTGTTACATCTACCACAAAAAATGCAAGTGAATGTCATCCTCCTCATATTGATGAGAAACTGTTGGTGGATAATATTGATGAAGGAAAACTAATGCAATTATGCAGAATTGTTGAAGCTAGTGAGACTAATGGTTGGCATCAGCCTCAAAGAGATAAAATGATTTCATCTAGTGGGTTAAAGAGCCAAGATATTAAGTGTTTAACAAGGGATATGAATTCAGAATTTTCAAATATGATTACAACACCTATTCAGTCATTAAAATTTCCTTTATTAGAAAATAATAGACCAACATGGGAGATTAAAAATGTGTATGAACCACTTGCACAACCATCTTTGAGGATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCTTGCTTCTGCTGGAGATATTGTAGAAGAAAGGCTTGAGGGAAAACCATCTTCTCTGTTTCATCAAGGGCAAAGATCTCACCCTGTATTTGTTAAACCATCAAAGACTGGTCTTACCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCTCAAGCACGTGTTGCCCGGCCACTTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGATTACTGATGAAGAGCTGGAGCAATTGTCTGGAAATTTCAAATCCACTGTAGTGCCATTGTTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGAATTGGGCGACTTGTTCTTCCAAAGGCTTGTGCTGAAGCTTTTTTCCCTCCTATTTCTCAATCAGAAGGTCTTCCTTTGGAAATGCGTGATGTGAAGGGGAATGAATGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCAATGGAATTGGTTGCGGGTGATACTGTGACATTTAGTCGGATAGATCCTGGTGGCAGACTTATTATGGGTTTCAGAAAGACATCAATTTCTCTAGAAACACAGGATGCGTCTACATCTGCACATTCTAATGGGATTACAACAAAGGAAACAACTATTTCTGGTGCAACTGAGAACCTGCCCTCAGGAAGTAGTTATTCTGATCTTTCACAGTCTGTGGAAGGGAACAGGGAACCTCACTTAAATAGACAATCAGAACACCTGCATTTGGGTAGCAGGGTAGCTGATTTTTCTCAAACGGAAAATTATGGCCAGATAACACAAAATGATTCACTGCAGCAATCAATTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATCGGGACTAAAAGTAAGAGGTTGCTCATTAATTGTGATGATGCTTTGGAGTTGAGACTAACGTGGGAGGAAGCACAAGACTTACTTCGTCCACCACCCAGTGTTCAGCCAATCATTGTTACAATTGAGGACCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTTTATTCAGAGCCTGCCCATCTGGGGGGCAGGAACAATGGGCTTCATGTGACGATTGCTCTAAATGGCGAAAATTGCCTGTAGATGTTCTTCTACCACATAAGTGGACTTGTTCTACAAATGTCTGGGATCCAACCAGGTCTTCATGTTCTGCACCGGAGGAGCTAGGACCTAAGGAATTGGAAGATCTTTCGAAATCCAGCAAAGACTTTAAAAAGCGAAGATTTACAGAAAATAATAAGTCAGTCCAAGAATTAGAACCTTCAGGCCTTGATGCTCTTGCTAATGTGGCAGTGTTGGGAGATGGTCTCGGGGATCCTTCTGAGTCATCAGCTGGACCCACCACCAAACATCCTAGACATCGTCCTGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCCGCCTGTACTTGCAACGTGTGCATGACCGTGAAAAGGCGGTTCAAAACCCTTATGCTGCGTAAGAAGAAACGCCAATCCGAGCATGAATCAGATGCTAAACCGATGGATCGTAGAGAAGAGTCTTCAGTTATGAATGGAGCACCTAGGGAAGACACAAGTCATGTGGAGAAAGAAGGAAGCATGAATAGAAGACAGCTTGAGGTGGGTGAATCCAGTGCTGTGCAGATAGATCTGAACAGTCATCCTGATCGTGACGACATGCAAGTTGATGCACCAAGCATGAATGGTCATGTTGGAGCTCCAAACTATCCACCACAGGTATATATGGATCAACATGGCCCTAACCCTAATGGGAGTCAGGGATACTTCTCTAATCGGGGAAGCTTCGGATCAGTTATCTGGGAGAAGGAAAGAACAGACAAGGTATACCATGATCCCAATTCAAGCCAGAACAATCCTCCTTGA 2685 0.4361 MGSEVCVGVSGVSATAHEWKKGWPLPYGGFAQFCNNCGILTECKLDTLDSMSAYEASIFCSKFHREETGWRDCGFCNKPIHSGCIVSRSLFDYLDFGGIGCISCIKASGSRLNTKEPNGAVTSTTKNASECHPPHIDEKLLVDNIDEGKLMQLCRIVEASETNGWHQPQRDKMISSSGLKSQDIKCLTRDMNSEFSNMITTPIQSLKFPLLENNRPTWEIKNVYEPLAQPSLRMSLGIPSGNSALASAGDIVEERLEGKPSSLFHQGQRSHPVFVKPSKTGLTMNIETNKGMNSISQARVARPLVEGRGKSQLLPRYWPRITDEELEQLSGNFKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPISQSEGLPLEMRDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMELVAGDTVTFSRIDPGGRLIMGFRKTSISLETQDASTSAHSNGITTKETTISGATENLPSGSSYSDLSQSVEGNREPHLNRQSEHLHLGSRVADFSQTENYGQITQNDSLQQSISVSEKKRTRNIGTKSKRLLINCDDALELRLTWEEAQDLLRPPPSVQPIIVTIEDHIFEEYNEPPVFGKRTLFRACPSGGQEQWASCDDCSKWRKLPVDVLLPHKWTCSTNVWDPTRSSCSAPEELGPKELEDLSKSSKDFKKRRFTENNKSVQELEPSGLDALANVAVLGDGLGDPSESSAGPTTKHPRHRPGCTCIVCIQPPSGKGRHHSACTCNVCMTVKRRFKTLMLRKKKRQSEHESDAKPMDRREESSVMNGAPREDTSHVEKEGSMNRRQLEVGESSAVQIDLNSHPDRDDMQVDAPSMNGHVGAPNYPPQVYMDQHGPNPNGSQGYFSNRGSFGSVIWEKERTDKVYHDPNSSQNNPP 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1051 894 MobiDBLite consensus disorder prediction 449 494 - -
Lele03g1051 894 MobiDBLite consensus disorder prediction 762 804 - -
Lele03g1051 894 Gene3D - 609 663 - -
Lele03g1051 894 Pfam B3 DNA binding domain 341 440 IPR003340 GO:0003677
Lele03g1051 894 MobiDBLite consensus disorder prediction 449 491 - -
Lele03g1051 894 FunFam B3 domain-containing transcription repressor VAL1 319 446 - -
Lele03g1051 894 Pfam CW-type Zinc Finger 611 653 IPR011124 GO:0008270
Lele03g1051 894 ProSiteProfiles Zinc finger CW-type profile. 606 656 IPR011124 GO:0008270
Lele03g1051 894 CDD B3_DNA 339 440 IPR003340 GO:0003677
Lele03g1051 894 SUPERFAMILY DNA-binding pseudobarrel domain 338 442 IPR015300 -
Lele03g1051 894 MobiDBLite consensus disorder prediction 833 867 - -
Lele03g1051 894 MobiDBLite consensus disorder prediction 758 812 - -
Lele03g1051 894 Gene3D - 319 443 IPR015300 -
Lele03g1051 894 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 5 857 - -
Lele03g1051 894 ProSiteProfiles B3 DNA-binding domain profile. 341 442 IPR003340 GO:0003677
Lele03g1051 894 MobiDBLite consensus disorder prediction 700 722 - -
Lele03g1051 894 SMART B3_2 341 441 IPR003340 GO:0003677
Lele03g1051 894 MobiDBLite consensus disorder prediction 852 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1051 Lele-ChrLele03 6076719 6082514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1051 1 831 B3 DNA Binding Superfamily AT2G30470 45.192 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele03g1051 B3 9.9e-15 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1051 03 6076719 6082514 Lele03g1051 03 6076719 6082514 ECH
Lele01g1046 01 6058514 6064348 Lele03g1051 03 6076719 6082514 hybridization
Lele02g1072 02 6726647 6726991 Lele03g1051 03 6076719 6082514 hybridization