Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1043 ATGCGCGCGTGTTACGGCACTTATCCTCCCCTCGTAGAACACGCACAACTATTCCTTGAAGATTTCTTGCAACGCGAGGAAGAAGAAAGGAGAGACGAATGCATTCCCTCTGGGCTGTGTGAAAGGAAGGATAGAAAGTTCTACAACACATGGCTTAGAACGAACACGCAAGGTTTGCTCTCAGAGATGCAAGATCCGCCTTCAAACCCTACCCCCAATCCCTCTTCTCACAATGCCAATGCCAATGCCGCTTCTCAATTCCCGCCACCGCCGCCCGCCGTCTCCGCTTCCCCGCCGCTGACGGCGACTCCCGCAGCCTCCTCTTCGTCTTCTTCGCTCGTCATGAGGGGAGGAGCTGCTGCCACTGGTGTCGGTGGGTCCCACGCACTCCACCACCACCACCACCATAGGAGGGCCCGCTCCGAGGTTAACTTCCGGTTGCCCGATGACATGATGGATCTGTCGCCGTCCGATCCGTTCAATGGCGGCTCATCCACGGCTAGCCTTGAAGAGATCGGATCCGAGGACGACCTCTTCTCCACTTACATTGATGTTGACAAACTCGGAGGTGCTAACGGATCGGGAAGTGGTGGCAATGGATCAGATCAGAATGGCAATGGGAATGGGAATGGCGTAGGAACAAGCAATCGCAATGAAAGAGAGAAGAGCCCGAGTGCAAGGCCAAGACACAGGCATAGTAGCTCCGTGGACGGGTCGACTTCTACAAGCATGTTTGGAGAGATTATGGAGGCAAAGAAAGCTATGCCTCCAGATAAGTTAGCTGAACTGTGGACGATTGATCCCAAGCGTGCCAAGAGAATCCTCGCGAATCGACAATCCGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATTCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAACTTACACTGTACCAGAGGGACACAACAGGTCTGAGCACAGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAACAACAGGCACAGCTTCGAGATGCTCTTAACGAGGCATTGAAGAAGGAAGTTGAGCGACTTAAGATTGCAACTGGGGAGATGATGAGCCCTTCCGAATCATTTAATCTGGGAATGTACCAGATGCAATTTACAGCTTCAAACTTCTTTCCACTTCCACCACAGTCAGGGCCTTCTGGTCACCAGAGCATGCAGTTGCCGTCATTCAATCACCCGTCTAATATGCCAACTCATCATCAACATCAACTGCAACAAACAAACTCTCATCCGTTCTCAGAAATGATGCAGAATGACCAACTTGGTCGTTTGCAGGGGCTTGACATTAGTGGCATAGGATCACTCCTTATGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1410 0.5099 MRACYGTYPPLVEHAQLFLEDFLQREEEERRDECIPSGLCERKDRKFYNTWLRTNTQGLLSEMQDPPSNPTPNPSSHNANANAASQFPPPPPAVSASPPLTATPAASSSSSSLVMRGGAAATGVGGSHALHHHHHHRRARSEVNFRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGANGSGSGGNGSDQNGNGNGNGVGTSNRNEREKSPSARPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPSESFNLGMYQMQFTASNFFPLPPQSGPSGHQSMQLPSFNHPSNMPTHHQHQLQQTNSHPFSEMMQNDQLGRLQGLDISGIGSLLMKSEGPSLSASESSTTF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1043 469 MobiDBLite consensus disorder prediction 100 116 - -
Lele03g1043 469 SMART brlzneu 265 329 IPR004827 GO:0003700|GO:0006355
Lele03g1043 469 CDD bZIP_plant_RF2 270 319 IPR044759 GO:0003700|GO:0006355
Lele03g1043 469 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 74 433 - -
Lele03g1043 469 FunFam probable transcription factor PosF21 268 321 - -
Lele03g1043 469 MobiDBLite consensus disorder prediction 190 242 - -
Lele03g1043 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 267 330 IPR004827 GO:0003700|GO:0006355
Lele03g1043 469 Coils Coil 285 312 - -
Lele03g1043 469 MobiDBLite consensus disorder prediction 220 234 - -
Lele03g1043 469 MobiDBLite consensus disorder prediction 194 219 - -
Lele03g1043 469 SUPERFAMILY Leucine zipper domain 269 320 IPR046347 GO:0003700|GO:0006355
Lele03g1043 469 MobiDBLite consensus disorder prediction 60 168 - -
Lele03g1043 469 Gene3D - 268 320 - -
Lele03g1043 469 Pfam bZIP transcription factor 269 324 IPR004827 GO:0003700|GO:0006355
Lele03g1043 469 Coils Coil 333 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1043 Lele-ChrLele03 6041390 6045968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1043 135 469 bZIP Transcription Factor Family AT2G40620 53.889 1.93e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele03g1043 bZIP_1 8.3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1043 03 6041390 6045968 Lele03g1043 03 6041390 6045968 ECH
Lele01g1040 01 6017339 6019916 Lele03g1043 03 6041390 6045968 hybridization
Lele02g1052 02 6514818 6517530 Lele03g1043 03 6041390 6045968 hybridization