Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1036 ATGTATGGCGGTAAAGAGCATAAAGATGATATTAAAGGAGACCCCGGTTATGAGGAAACCGACCCGAGTGGTCGCTATGGCAGGTTTGGAGACATTCTTGGAAAAGGAGCAATGAAGACCGTATACAAAGCTATTGATGAGGTCCTTGGGATAGAGGTAGCATGGAACCAGGTCAGACTCAATGAGGCACTTCGCACACCGGATGATTTGCAGCGGCTTTACTCGGAGGTTCATCTTCTCAGTACCCTCAAGCACCAATGCATCATAAGATTCTACACCTCCTGGATTGATGTTGATAAAAAGACCTTCAACTTCATCACAGAAATGTTCACTTCAGGGACCCTGAGAGAATACAGGAAGAAATATATGCTAGCTGGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAAGGTCTTGTTTACTTACATGACCATGATCCTCCGGTAATTCACAGGGACCTCAAATGTGATAACGTATTTGTCAATGGCCATCTCGGACAAGTGAAAATTGGCGATTTAGGACTAGCGGCTATTCTCCGTGGTTCCCAGTCTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCTCCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTCTTAGAAATGCTTACATCTGAATATCCATATGGTGAATGTACTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTACCAGCAGCACTTTTTCGGATTGAAGACGCAGAAGCACAGAAATTTGTTAGAAAATGCTTGGCAGCTGCGGCAGAAAGACCATCAGCTAAAGAATTATTGCTTGATCCTTTTCTTTCATCTAATGACGCATTATCAAATACAAAGTTTGAGATTCAAAAGCCACTGCTGAATGACATTGAGATGGAAAAGTTGCATTTGACCGATGGTTCACACAGGACTGGGATGAAAATCACTGGGAAGCTGAATCCTGAGGACGATACAATATTTCTCAAAGTGCAAATTACAGATAAAAATGGTTCTGCAAGGAACATTTATTTTCCCTTCGACATTTTAACGGATACTCCCATCGATGTTGCAATGGAGATGGTGAAAGAGTTAGAGATCCCTGATTGGGAGCCATTTGAAATTTCTAGTATGATTGAAGCAGAGATATCTGCTCTGCTGCCACAAGGGAGGAAGAGGGACTGTTTAGATACCTTTCATATGTTCAATTATCAGAATGATGACAACAATGAACTTCGATATCATTTTGGCTCATTGTCATCTTGTTCATCATCCCAAGAATCGGTATCAGCCATAGTCACAAAAGCTGAGGAACTACCCAATGGATATTACTGGCTCCATGATGACTTGATTGATGATTCCAGTTCCCGATGCTCCTCTCAGGGGACATATTCTAACTTGAATTATGTTTCTGCGGATGACCAGGAGTACAATGTGACTCATACAAGAAAAGATAAACAACCAGTCACAAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGACCTAAGCACTGGGTTGTCTCCGTCTAGAACAAGTTGCAACTACTGCAAAGTTTTAGTGGGACCACATGCTGCTGCTGCATCTACTAGTAAAAACAAGAAGATAGACAATCGTAGCTTGACAAGGAACAATTCATTTATTGATGTACATAGCCAAATGCTACACCGTTCCCTAGTTGAGGAGGTAAGCAAGAGACGTTTATTCAAGACAGTGGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAGGCTCCCAGAAAAAAATCACAACCACTGTTTGGTTCTTTAGATGTGAAATCTTCAAGGAGTGGCAAGGGACAAGGACTTCGGAGTTATTCTTTGAACATCAGAAGTGAAAGAGATAGATAG 1902 0.4159 MYGGKEHKDDIKGDPGYEETDPSGRYGRFGDILGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDVDKKTFNFITEMFTSGTLREYRKKYMLAGIQAIKSWARQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYGECTNPAQIYKKVTSGKLPAALFRIEDAEAQKFVRKCLAAAAERPSAKELLLDPFLSSNDALSNTKFEIQKPLLNDIEMEKLHLTDGSHRTGMKITGKLNPEDDTIFLKVQITDKNGSARNIYFPFDILTDTPIDVAMEMVKELEIPDWEPFEISSMIEAEISALLPQGRKRDCLDTFHMFNYQNDDNNELRYHFGSLSSCSSSQESVSAIVTKAEELPNGYYWLHDDLIDDSSSRCSSQGTYSNLNYVSADDQEYNVTHTRKDKQPVTKSHKCKMFSPGEDLSTGLSPSRTSCNYCKVLVGPHAAAASTSKNKKIDNRSLTRNNSFIDVHSQMLHRSLVEEVSKRRLFKTVGAVENIGFQNPLEAPRKKSQPLFGSLDVKSSRSGKGQGLRSYSLNIRSERDR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1036 633 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1036 633 MobiDBLite consensus disorder prediction 605 625 - -
Lele03g1036 633 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 591 - -
Lele03g1036 633 MobiDBLite consensus disorder prediction 1 23 - -
Lele03g1036 633 Gene3D Phosphorylase Kinase; domain 1 13 108 - -
Lele03g1036 633 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Lele03g1036 633 MobiDBLite consensus disorder prediction 594 633 - -
Lele03g1036 633 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1036 633 CDD STKc_WNK 25 285 - -
Lele03g1036 633 SUPERFAMILY Protein kinase-like (PK-like) 29 307 IPR011009 -
Lele03g1036 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele03g1036 633 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Lele03g1036 633 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Lele03g1036 633 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1036 Lele-ChrLele03 6001707 6005355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1036 17 598 MAP Kinase Kinase Kinase AT5G58350 57.509 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele03g1036 Pkinase 1.1e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1036 03 6001707 6005355 Lele03g1036 03 6001707 6005355 ECH
Lele01g1034 01 5977722 5981362 Lele03g1036 03 6001707 6005355 hybridization
Lele02g1046 02 6454772 6458618 Lele03g1036 03 6001707 6005355 hybridization