Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1035 ATGGGCCTCACCTGTTCGCTTACTTATCCTTTGTCAACTGAACACTACACAACCAGCAAAAGTAGAAATTCAGTAGTGAAAACTCTGCAAAATCTTACTAAAGATGAATCTTACAGTGGACCACCAGCATTATTTTTTTCCCCTGTTATAAGGCCAGCTTTCAGTTCATTGCATCTTCGATTTCAACTCTTGCAAATAAGTACAATTCTGAGATACCTCAGAGAAATACAGAACTCCTCTGAGTGTGAGAGAGAGAGATCAAGGTTGTGTTGTGTAGTGCTTGAGGAATTTCATAATCTGATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGGAAGCAGAAAGGTTCTCATGCTGTGAAGAACCAAGCAAGCTCACCAGTAATGTCCCAGAGATCGCCCCCAAATTGTTTGCATTATTTCCCCACTGAACCTGACAAAGCTGGTATGCTTTTCAACTCACCAATTCAGACCAAAGTCACAGACTTTTCATTCACTGTTTCTCCAAGAAGGTCATCTAAGAGAAGAGTTCAGAGGAAAACTATTTACAAGCCTTCTCCCCCAGTTGTGTCCTCTGTCTCAACCTCTTGCAGCTGCCATTGGACTCATCAGCCAAATCAAGCCGAGTCTCCGGATTTCTATGCTTCTTCCATTGAGAGTTCTTCCTCTGAATTAGATATCTATGAATGCGTTACATCTGAGTCTGATGAGTGTGATAGCTTAGCAGCTCCTCACATGTTGAATGGACTATCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAACGATATCATCATAGACATGAACAACGAATCGTTTGCTGTGAATCCTGAAAAGCTAGATGGGTTTGATGCAATTTCGAAATTAGGCCTTCCTCCTATAGTGACAAAACCAGCGAGGTTTGATGATCAGGTCATTAAAGCACATTACTTGAAATGTTCATCTAAGGTGGAGGAAAGCAGCAGAACTACAACTCCAAATAGGAAAGTTCAAGCCTGTGCAAGAAGGAGTGTATCATCATCATCATCCTCCAGTGCATGCAAGGTTTCAAGGAACACAACAGGGTTTCCAGAAGGTTTTGCAGTTTTCAAGTCCTCAATTGATCCAGAGAGAGATTTCAAGGAGTCAATGGTGGAGATGATAAGAGAGAACAATATATGGTTATCAGAGGATTTGGAGGATCTTCTAGCTTGTTATCTCTCACTTAACTCGAGAATACCATGA 1272 0.4135 MGLTCSLTYPLSTEHYTTSKSRNSVVKTLQNLTKDESYSGPPALFFSPVIRPAFSSLHLRFQLLQISTILRYLREIQNSSECERERSRLCCVVLEEFHNLMGNHRFKLSDMIPNAWFYKLKDMSRSRKQKGSHAVKNQASSPVMSQRSPPNCLHYFPTEPDKAGMLFNSPIQTKVTDFSFTVSPRRSSKRRVQRKTIYKPSPPVVSSVSTSCSCHWTHQPNQAESPDFYASSIESSSSELDIYECVTSESDECDSLAAPHMLNGLSPDCSCRVSSSTNDIIIDMNNESFAVNPEKLDGFDAISKLGLPPIVTKPARFDDQVIKAHYLKCSSKVEESSRTTTPNRKVQACARRSVSSSSSSSACKVSRNTTGFPEGFAVFKSSIDPERDFKESMVEMIRENNIWLSEDLEDLLACYLSLNSRIP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1035 423 Pfam DNA-binding domain 101 141 IPR025830 GO:0003677
Lele03g1035 423 Pfam Transcriptional repressor, ovate 382 421 IPR006458 -
Lele03g1035 423 MobiDBLite consensus disorder prediction 128 150 - -
Lele03g1035 423 ProSiteProfiles OVATE domain profile. 378 423 IPR006458 -
Lele03g1035 423 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 377 421 IPR006458 -
Lele03g1035 423 MobiDBLite consensus disorder prediction 133 150 - -
Lele03g1035 423 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 168 421 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1035 Lele-ChrLele03 5995593 5997286 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele03g1035 DNA_binding_2 3.7e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1035 03 5995593 5997286 Lele03g1035 03 5995593 5997286 ECH
Lele01g1033 01 5975069 5976157 Lele03g1035 03 5995593 5997286 hybridization
Lele02g1045 02 6447311 6448396 Lele03g1035 03 5995593 5997286 hybridization