Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1032 ATGAGAATGGTGGATAGGCAGAGAAAGAAAAATAGTGATCCGTACCATTCCATATTTTTCAATCATCAATTTTCCCCCCAACACTTCACTCTTATCTATCAGACCCTACTACAACTCACAGAGCTAGCTAGCTCTAGCTCGCTATTGGTGGTTGGTTTCATGCTGTTCATGGAGAGGAAGAGAAAGATCAATCTTAGGCTCATAGTTATAAACAAATTCCATCTCTCTTTCAGATTCTCCTTCTCCTCTGTCTTCTTCGTCCTCTTATGCTGCACTGTACTCCTCAGCACTGCATGTTCAGATACCAGCAGGTCCAGTCACTCTTTTGCCAAAGTCGATGGAGATTTTCAGGAAGGCGGGAGAATGGGGAAGGGCAGGAGGATACTGGGCGGGCTAGGGTCAGCGCCGCCGCGGTGCGCGTCAAAATGCGGGAGTTGCAGGCCATGCAGGCCAGTGCACGTGCCGGTGCCGCCGGGGACGCCGGTGACGGCGGAGTACTACCCAGAAGCGTGGAGGTGCAAGTGCGGGAATAAGCTAACTTTGAATGATGCATATGAGAATAGTGAAATTGATGGAGCTACAGAGACTTTGTCCATCAAATTTAGCCTGTGTAGTGAACGGTGTTGGTTTCTAGATATGAAGTGA 645 0.4868 MRMVDRQRKKNSDPYHSIFFNHQFSPQHFTLIYQTLLQLTELASSSSLLVVGFMLFMERKRKINLRLIVINKFHLSFRFSFSSVFFVLLCCTVLLSTACSDTSRSSHSFAKVDGDFQEGGRMGKGRRILGGLGSAPPRCASKCGSCRPCRPVHVPVPPGTPVTAEYYPEAWRCKCGNKLTLNDAYENSEIDGATETLSIKFSLCSERCWFLDMK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1032 214 Pfam Epidermal patterning factor proteins 132 179 - -
Lele03g1032 214 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 86 179 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1032 Lele-ChrLele03 5984042 5987204 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0461 27 5626897 5639380 Lele03g1032 03 5984042 5987204 CCT
Lele03g1032 03 5984042 5987204 Lele03g1032 03 5984042 5987204 ECH
Lele01g1031 01 5963318 5966398 Lele03g1032 03 5984042 5987204 hybridization