Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1028 ATGGAGAACAGATCAAGTGTTTTAATGGGAAGATATGAATTAGGAAGATTGCTAAGCCAAGGCACCTTTGCAAAAGTGTACTATGCACGAAGCACCTCAGCTAATCAGAGTGTGGCTGTTAAGGTAATTGACAAAGATAAGGTTATGAAATCTGGGCAAGCTGAACACATCAAGCGTGAAATATCTATTATGAGGAAGGTTAGACATCCCTATATTATACAGCTTTTTGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGCGAACTCTTCACCAAGTTAGCTAAAAAAGGAAAGCTCAAAGAGGAAGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGAATTTTGTGACAGCAGAGGCGTGTACCACCGGGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATGGGAATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGTGGAATCCAAGCGGGAAGATGGCCTGCTGCATACAACTTGTGGCACACCCGCATATGTTGCTCCTGAAGTCATCAAAAGGAAAGGGTATGATGGTGCCAAAGCTGATGTTTGGTCTTGTGGGGTAGTATTGTTTGTATTATTGGCAGGTTATCTCCCTTTTCATGATTCGAATTTGGTAGAGATGTATAGGAAGATTGGCAAAGCAGAATTTGAATGTCCTAATTGGTTCTCACCAGAAGTTCGCATACTTTTATCCAAGATGTTAGACCCAGATCCTGATACTAGGATTTCCATGGAAAAGATTAGGGAGTGTTCTTGGTTTAAGAAAGGACCAAATTCTATACGTAAAAAGGAAACGAAGGCCGTCTCTTCATCAGGTAAAAATCCTTCCGATCGTAGCGACGAAGCAGAAGCAAAGCAGGAGTCAGTTGTACCAACCAGTATAAATGCATTTGATATCATATCCCTTTCTGCTGGTTTTGATCTTTCGGTATTCTTTGAAGGCAGTTTTAAGAAGAGAGAAGCTAGATTTACCTCAAGACAACCTGCACCGGCTATCATCTCGAAGCTGGAAGAGACTGCTAAGCGTCTAAAGATGAAAATAAAGAAGAAAGCCGCAGGTTTGTTAAAGCTAGAGGGCCTCAAGGCAGGCAGAAAGGGTGTTTTGTCCATTGATGCAGAGATCTTTGAGGTTACTCCGTATTTCCATCTGGTTGAGATGAAAAAATCAGATGGGGATACATTGGAATTTCAGAAAATACTGAAGGAAGGTATAAGGCCTGCCCTTCAGGATATTGTCTGGGTTTGGCAAGGTGATGACCAAGAACAGCAATCACAGCAATCAGAACAACTGCATATACATGAGCCGCAGCCACAACAATCTTAA 1365 0.4132 MENRSSVLMGRYELGRLLSQGTFAKVYYARSTSANQSVAVKVIDKDKVMKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVMEYAKGGELFTKLAKKGKLKEEVAHKYFWQLINAVEFCDSRGVYHRDIKPENLLLDENGNLKVSDFGLSALVESKREDGLLHTTCGTPAYVAPEVIKRKGYDGAKADVWSCGVVLFVLLAGYLPFHDSNLVEMYRKIGKAEFECPNWFSPEVRILLSKMLDPDPDTRISMEKIRECSWFKKGPNSIRKKETKAVSSSGKNPSDRSDEAEAKQESVVPTSINAFDIISLSAGFDLSVFFEGSFKKREARFTSRQPAPAIISKLEETAKRLKMKIKKKAAGLLKLEGLKAGRKGVLSIDAEIFEVTPYFHLVEMKKSDGDTLEFQKILKEGIRPALQDIVWVWQGDDQEQQSQQSEQLHIHEPQPQQS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1028 454 Gene3D Kinase associated domain 1, KA1 303 428 - -
Lele03g1028 454 Pfam NAF domain 305 363 IPR004041 GO:0007165
Lele03g1028 454 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele03g1028 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lele03g1028 454 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Lele03g1028 454 FunFam Non-specific serine/threonine protein kinase 303 427 - -
Lele03g1028 454 MobiDBLite consensus disorder prediction 275 301 - -
Lele03g1028 454 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1028 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 420 - -
Lele03g1028 454 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g1028 454 Gene3D Transferase(Phosphotransferase) domain 1 92 273 - -
Lele03g1028 454 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Lele03g1028 454 SUPERFAMILY Protein kinase-like (PK-like) 8 268 IPR011009 -
Lele03g1028 454 CDD CIPK_C 309 423 - -
Lele03g1028 454 FunFam Non-specific serine/threonine protein kinase 2 300 - -
Lele03g1028 454 MobiDBLite consensus disorder prediction 433 454 - -
Lele03g1028 454 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1028 Lele-ChrLele03 5954652 5956016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1028 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 66.157 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele03g1028 Pkinase 4.6e-74 CL0016