Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1026 ATGTCCAGGGATCGAGCTTGGGCTTCCATGGCGGCGACTCACAGCAGCAACAACAAGATGAAGACGACGATGACGTGTCGACGTGCTGACCAGTTAACCAAACAGCCATCGAATCTCTCCTGTTACGAAGGCTACCACGGAGACGAAACCGCTTCTGTTCCATTCACGTGGGAATCACAGCCAGGTACTCCCAAGCACCGATTCAGTGAAACCACTCTTCCTCCTCTCGCTCCTCCTCCCTCTTATTTCTCTTACTCTGCTTCTTCTTCTTCTTCTACTCCGAGATCCTTTCTTAAACCTCATAAGAACAAGAATTCTTCTGCACCTAAGTCCAATAATCTTTTGCAATCTATATTACCCAAGCGAACCGCAAGGAAATCGCGGGATGGTGCTCCTCCTCCGCTGCCGCCGTCACCACCTGCGAATTCTTCGCCATCTCTGTCGTTTTCTGCCTCCTCCTCATCTTCGTCGTCGTCGTATCAGTCGTGGAAGAGATCGCGTTCCGTGCCGTCTACACCAACGACGCGTCCGAGAAAGGAGAAGGAGGACGAAGAAGATCTGTATGATGTGGCTGGTTGGGGAATGTGCTTTGGTAATGCGGGTTTTAGAGGGTGTTATTCCTCCATGATCAAGAAGGTTATGCTAAGAGATTTTCTCACAGGGTGCCACATAGACTTCCACTTGAAAACTTTCAGTGAAAAATACAAGCCAACCAATGAAGAAGCATTACAAGAAAACCCAGTCCTTCAAGAGTCTGACATTGACGTTCAAGCTCCACCACACAGATCAAGACAATCAAGAGGCATGCTTGGATGTCCAGAAACAGAAAGAGCAGAAGAGATAGCGAAGAGCATAACAGAGGCGGCAGAAGCGCCTTGTAAAATGGGAAGGAGGAATTTCTATGGACCAGAAGTTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCTGAAGAATGCCCTTTCTCTCCTTACTTTTCACCGCATGAACCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTGCCTGAGAGCCAAAGAGCAGATGCAGCAAACAGTCTGGTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAAGCAGAGCTAAATGCTTTAAGATCTGAGATTTTCAAGTACAAGTATAGAGAAGCTGCGAATCAGATCATTTCTTCTCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGAACCTATTTCTACAGAATCACAACAACAAGGACTTGTTCATCAACCTCAACCTCCTCCCCATCCTCCACCAAAACCATCATCATTACCTTCTTCTGCTTCTGTTAATGTTCTTTCATCCTTGTCTTCATCTTCCAGTTCTAACGTATACACACCACCTAAGAGCACAATCAGTCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 1536 0.4635 MSRDRAWASMAATHSSNNKMKTTMTCRRADQLTKQPSNLSCYEGYHGDETASVPFTWESQPGTPKHRFSETTLPPLAPPPSYFSYSASSSSSTPRSFLKPHKNKNSSAPKSNNLLQSILPKRTARKSRDGAPPPLPPSPPANSSPSLSFSASSSSSSSSYQSWKRSRSVPSTPTTRPRKEKEDEEDLYDVAGWGMCFGNAGFRGCYSSMIKKVMLRDFLTGCHIDFHLKTFSEKYKPTNEEALQENPVLQESDIDVQAPPHRSRQSRGMLGCPETERAEEIAKSITEAAEAPCKMGRRNFYGPEVSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRSEIFKYKYREAANQIISSHGGALVSSVEEPISTESQQQGLVHQPQPPPHPPPKPSSLPSSASVNVLSSLSSSSSSNVYTPPKSTISHGSISSENVPYFV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1026 511 MobiDBLite consensus disorder prediction 52 185 - -
Lele03g1026 511 ProSiteProfiles LOB domain profile. 314 415 IPR004883 -
Lele03g1026 511 MobiDBLite consensus disorder prediction 441 511 - -
Lele03g1026 511 MobiDBLite consensus disorder prediction 144 173 - -
Lele03g1026 511 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 311 459 - -
Lele03g1026 511 Pfam Lateral organ boundaries (LOB) domain 315 411 IPR004883 -
Lele03g1026 511 MobiDBLite consensus disorder prediction 470 505 - -
Lele03g1026 511 Coils Coil 394 421 - -
Lele03g1026 511 MobiDBLite consensus disorder prediction 53 67 - -
Lele03g1026 511 MobiDBLite consensus disorder prediction 455 469 - -
Lele03g1026 511 MobiDBLite consensus disorder prediction 82 120 - -
Lele03g1026 511 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1026 Lele-ChrLele03 5946724 5950937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1026 307 423 AS2 family AT2G30340 85.470 1.02e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele03g1026 LOB 2e-40 No_clan