Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1015 ATGGCTTCAACTGCTCTTCAATGGCTAAGCCTTGTAGGCATGATTTGGCTCCAAGCCATAAACGGCACAAACACCAATTTCCCTGCCTACTCATCTCAATTGAAGCAGCTTCTTTCAATTTCACAAGTTCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGAAAACTTCTTGGCTGGTTCTCTGGCATGGCTTCTGTTCATCTCCCTCTCTGGCTTGTTATCCTGATCGGTTCAAGTCTTGGGTTGGTTGGTTATGGAATCCAATATCTCTTCATAACACAACAAATCTCCTCTCTCTCCTACTGGCATGTCTTCTTACTAACTGTTCTTGCTGGGAATAGCATTTGTTGGATTAACACTGTAAGTTACGTCATCACCATCAGGAACTTCCCATCTTATCACCAAGTCGCCGTGGGGTTAACAACTAGTTATCAAGGGTTAAGTGCAAAGATCTATACTGATATTGTTCAAGTTATTTCTCCCCACAAAAAAGCTAGAGCCTTTCTTTTCTTCAACTCTGTCTTACCTCTCATAGTTAGCCTCATGGCAACTCCTGTAACTAGAGAAATTCAAGCCACAAGGCCTAAACGAATGCGTGTTGGATTTGTTGTAATGTTTGTTATTACAATTTCCACTGGTGTATATGCTGTTCTTAGCAGCTTGCAGTTTTTGTCTCGCAAATTATCTCCATTGAGTAATCTGGTTGGTATTCTAGTGGCACTTCTCCTCCCTCTATTACTTCCAGTCTCAGAGAAGATCAACGAATTGGTGAGATCATGGCAAACCAATCGAGAAAGACTCAGAGTCTATCATTTTACAGTGGAGGAAAATAACAGTCCTAATGGAGAGAGGACAGAGATCAGTGAGCCAAAAGATGGAGAGGAGGAGGAGGAAGAAGATTGCAGCAGAGAGGTTCAAGAAGTTGTTGTCAGAGAAGAAATTGGCGTGAAGTTAATGCTGAGGAGAATAGATTTCTGGTTATATTTTTTAATATATTTCTTCGGGGCAACAATTGGCTTAGTCTTTATGAACAACTTGGGACAAATTGCAGAGTCCAGAGGCTACTCAAATACTTCATCTCTGGTATCCTTGTCTTCATCTTTTGTGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTCTGCAGGGGTAGGGTTAGGATTTCAAGGCCAGCGAGTATGGCGGCATTAATGTCTCCAACAGCGGGATCGTTCTTGTTGCTTCTCAACAGAACCGAGCTTGCTCTATACACGAGCACTGCCATAATAGGAGTGTGCACTGGAGCTATCACTTCCATTTCTGTGTCCATGACCACTGAACTATTTGGGACAAAGAATTTCTCAGTGAATCACAACGTTGTTGTGGCCAACATTCCCATTGGCTCTTTTGCGTTTGGTTACTTGGCTGCTCTGCTTTATCGGAAGGAACAAGATGGAGATGGGAAATGCACAGGCATGGAGTGTTACAGAAGAACTTTCATCATCTGGGGTTCGCTCTGTTTCTTTGGGACATTGTTGGCTTTGATTCTTCATGCCAGAACTCGCAAGTTCTATTCGCAGAAACAACAGAGATAG 1581 0.4295 MASTALQWLSLVGMIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLLGWFSGMASVHLPLWLVILIGSSLGLVGYGIQYLFITQQISSLSYWHVFLLTVLAGNSICWINTVSYVITIRNFPSYHQVAVGLTTSYQGLSAKIYTDIVQVISPHKKARAFLFFNSVLPLIVSLMATPVTREIQATRPKRMRVGFVVMFVITISTGVYAVLSSLQFLSRKLSPLSNLVGILVALLLPLLLPVSEKINELVRSWQTNRERLRVYHFTVEENNSPNGERTEISEPKDGEEEEEEDCSREVQEVVVREEIGVKLMLRRIDFWLYFLIYFFGATIGLVFMNNLGQIAESRGYSNTSSLVSLSSSFVFFGRLMPSLMDYFCRGRVRISRPASMAALMSPTAGSFLLLLNRTELALYTSTAIIGVCTGAITSISVSMTTELFGTKNFSVNHNVVVANIPIGSFAFGYLAALLYRKEQDGDGKCTGMECYRRTFIIWGSLCFFGTLLALILHARTRKFYSQKQQR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1015 526 MobiDBLite consensus disorder prediction 278 302 - -
Lele03g1015 526 Gene3D MFS general substrate transporter like domains 5 516 IPR036259 -
Lele03g1015 526 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 525 - -
Lele03g1015 526 SUPERFAMILY MFS general substrate transporter 6 518 IPR036259 -
Lele03g1015 526 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1015 Lele-ChrLele03 5877140 5878952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1015 1 523 Nodulin-like Gene Family AT2G30300 48.876 8.14e-155 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1015 03 5877140 5878952 Lele03g1015 03 5877140 5878952 ECH
Lele01g1014 01 5867933 5870534 Lele03g1015 03 5877140 5878952 hybridization
Lele02g1029 02 6329334 6331145 Lele03g1015 03 5877140 5878952 hybridization