LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g1004	ATGCTTCTTAATGAGTCTCACGCGATTCCTCCCATGGGGGAAGGACGACAAAAGTTTGTTCAGAATGCAATTAAAGCGGCAACACAGACCCACATCAAGCTTGAAGATTCATTCATTTGCCATGCCTTCAATCTTCTCAACTCCAAGGGTTTCATTTTGGGAGATGACCCACTTAACTTCTCTGTTCCTCTCATTTTGCTCCAGCTTTCACTCATGTCCATCTTCACTGGTTTCTTTCTCTTTCTCCTCAAGCCCTTGGGTCAACCCCATATTATTTCTCAAATTCTTGGCGGTTTGACTTTAGGACCTTCAATTCTTGGGCGCCACTCAGAATTTGCCAAGAGAGTTTTCCCACCCAAAGGAAAATGTGTGCTTGATACCTTTGCGTTTTTTGGTTTAATGATATTCGTCTTCCTAGTTGGGGTAAAGATTGATCCAACCATCATTTCTAGATCAGGTAAAAGGACCTTGGCCATGGGAGTTTTAGGCTTCATTATTCCTTATACCTTAGCCCAAACGGTTGCCTTTATAGCCAGTCAGTTTTTTCCACAGGATCAAGATATTTCTGAGACGCTTCCTATTGTGGTGACAATTGCATCTATGACAGCGTTTCCAGTGATAACCTGTTTTCTTTCTGAACTCCACATTCTTAATTCAGAGATTGGTCGCTTGGCCTCTTCTTCTTCACTAGTTTGTGATGTCTTCCACTGGTTAGTCATGTCAATGCAGTTTACCTCAAGATTAGCCCGCACAGAGTCAATAGGAGTATGTTTTGAAATTTTCTTGGCAACTTCTCTTCTTATTTCTTTCATCATGTTTGTTGTGCGTCCAGCAGCATTATGGGCAATTCGACACACCCCAGAGGGGGAACCTGTAAAGGAAATCTATGTTTTCGGGGTCCTTGTGACATTTTTGCTCAGTGGATTCATGGGCCAAGTTCTTGGCTTACATGCATATCTTGTGTCTTTCGTGCTAGGGTTGGCTATACCAGATGGGCCGCCATTAGGAGCTGCACTGGTAGACAAGCTTGACTGCTTTGTTTCTGTAGTGTTCCAGCCTATTATTTTTATCGTTTGTGGATTGAGAACAGATGTTTTTGCCATTAAGGAGCTGAGGAACGTGGGTGTAATTCATTTAATAATTTTTGCTGCCTTCTGTGGGAAGATTTTAGCAGTACTATTGCCTCTCCTTTTGTGTAGGATGCCCTTCCGAGATGCTCTCTCTCTTGGTTTTGTTATGAACTGCAAAGGCATTGTTGAACTTGCCTTGTTGATTGACTGGAAATTAGAAAATACCATGAGTGAGGAATTTTATGCAATTATGATTGTTTCTGTAGTGCTCGTAACTGGGATTGTATCGACTGTTGTGAAAAACCTTTATGATCCATCCAGGAGGTTTCTTGCTTATAAAAGGAGGACAATTTTGCATCATAGCAGCCATGAACCACTGAGAATTCTTGCATGCGTTCACAAACCAGATAATGTCTTGGCAATTCTGAACCTCCTTGCTGCTTCCAATCCGAACACAAGAAGCCCCATTGATCTAGTGGTGCTCCAACTTGTTAAGCTCGCAGGCCGTGCTTCCTCTCTACTTGTCGCACACGTGCCACGCGAAAATACTTCTCAACATCCAACTGAATCTGAGAAAATTTTCAACTCATTCATGAAATTTGAGCATGAGCATGGAGGCCTGGTTACTCTGTGCTGCTATAAAGGCATCTCCCCATATGAAACAATGCACAATGATGTGTGCTACATGGCACTTGAAAAGAGAGCAACCTTTATAATCATACCTTTTCAGAAGAAGTTGATCTATGGAAAGAAACAAGTGTCATCATTTCCCTTCAAGCACTTGACTAAGAATGTTCTAGAAAAAGCACCTTGCTCAGTTGGCGTCCTTGTGGATCGTGGCAATCAACAAAACTTTTGGTGTGATCATTTTGTCAGCGAACCAATATACCAAGTAGCAGTGTTCTTCTTTGGAGGAGCAGATGACCGTGAAGCCCTTGCATTGGCAAGGCGCGTGTTGGAACAACCCAACGTGTATATAACTCTGGTTCATTTTTCTTCTTCAGCAGAGCTTGTTGCTGGTACAGAAAGGAGCAAAGTGCTTGATACCCAGATCCTGAGTGACTTTAGGCTCAGCGCCTTTCGGAACGAAAGAGTTTCATACAAGGAGGCGCGAGTAATGGAAGGGAGGGATGTGCTTTCAACTGTTGAAGACATAGACAATGTTTATGACCTTGTCATGGTTGGAAGAAGGCATGGAGATTCAAATCTGATGTCTGAACTTAAGAAGTGGAAGGATGGAGAATTGGGAACTGTGGGAGAGATTCTTGCATCCTTAGACATTGGAGTTAAAACTTCAGTTCTTGTGGTGCAACAGCAAACCAGATTATGGGGATTACGTGACCCTGAGGAATCAACACGCCTGAGAAGAGAAAGAATAGAAACTTATGGGGTTTGA	2466	0.427	MLLNESHAIPPMGEGRQKFVQNAIKAATQTHIKLEDSFICHAFNLLNSKGFILGDDPLNFSVPLILLQLSLMSIFTGFFLFLLKPLGQPHIISQILGGLTLGPSILGRHSEFAKRVFPPKGKCVLDTFAFFGLMIFVFLVGVKIDPTIISRSGKRTLAMGVLGFIIPYTLAQTVAFIASQFFPQDQDISETLPIVVTIASMTAFPVITCFLSELHILNSEIGRLASSSSLVCDVFHWLVMSMQFTSRLARTESIGVCFEIFLATSLLISFIMFVVRPAALWAIRHTPEGEPVKEIYVFGVLVTFLLSGFMGQVLGLHAYLVSFVLGLAIPDGPPLGAALVDKLDCFVSVVFQPIIFIVCGLRTDVFAIKELRNVGVIHLIIFAAFCGKILAVLLPLLLCRMPFRDALSLGFVMNCKGIVELALLIDWKLENTMSEEFYAIMIVSVVLVTGIVSTVVKNLYDPSRRFLAYKRRTILHHSSHEPLRILACVHKPDNVLAILNLLAASNPNTRSPIDLVVLQLVKLAGRASSLLVAHVPRENTSQHPTESEKIFNSFMKFEHEHGGLVTLCCYKGISPYETMHNDVCYMALEKRATFIIIPFQKKLIYGKKQVSSFPFKHLTKNVLEKAPCSVGVLVDRGNQQNFWCDHFVSEPIYQVAVFFFGGADDREALALARRVLEQPNVYITLVHFSSSAELVAGTERSKVLDTQILSDFRLSAFRNERVSYKEARVMEGRDVLSTVEDIDNVYDLVMVGRRHGDSNLMSELKKWKDGELGTVGEILASLDIGVKTSVLVVQQQTRLWGLRDPEESTRLRRERIETYGV	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g1004	821	Pfam	Sodium/hydrogen exchanger family	72	455	IPR006153	GO:0006812\|GO:0015299\|GO:0016020\|GO:0055085
	Lele03g1004	821	PANTHER	CATION/H + ANTIPORTER	39	798	-	-
	Lele03g1004	821	Gene3D	-	64	466	IPR038770	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g1004	Lele-ChrLele03	5826534	5829490	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g1004	27	821	Antiporter Super Family	AT2G13620	37.333	2.12e-175	524