Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1002 ATGGCGTCCCCCAAGATACACTTCATTCTGCTGCACATCTTCACCATTCTTATTGCTACAAGCAATGCCTGGAAACCCAAGTTCTCATCCATTCTAGTGTTTGGGGATTCAACAGTCGACCCAGGCAATAACAACTTCATTGAGACATTGTTTAAGGGAAACCATTTCCCATATGGCAGAGATTTCCCTGATCACGTTCCCACTGGTAGATTCTCCAATGGAAAATTGGTTACAGACTTCGTTGCCTCTCTTCTAGACATCAAAGAAACCGTCCCTCCTTATCTAGACCCAAATCTATCAGATCATGAACTTCTAACTGGAGTTAGCTTCGCCTCTGGCGGATCAGGACTTGATGATTTGACTATGGTTGCCTCTGGAGTGATCCCTGTTTCCAAGCAAATTGAGTACTTCAGAGAATATGTGGAAAAAATTAAGCGCATTGTGGGGAAAGAAGAAGCTCAGAAGGTACTTGGACGCGCTATAGTTATTATCAGTGCTGGAACTAATGACATGAGTTTCAACTTTTATGATGTTCCCACCAGAAAACACGAGTTTGACATTAGTGGATACCAAGATTTTCTGCAGTATAGGCTGCAAATCTTCATAAAGGAACTATACAACATTGGATGTAGGAAGATAGCTGTAGTTGGGCTTCCTCCAATAGGTTGCATACCCCTTCAGATAACAGCAAAGTTTAGGAATCCAAAGGATCGAAAATGTATAGAGCAAGAGAACTTAGACTCTGAGCTCTACAACAAAAAATTGGAAAGGCTATTACTTCATGTGCAAGCCACGCTTCCAGGAAGCAGAGTTGTTTACGCAGACGTGTATAACCCCTTTAACAACCTCATCAATCAACCTGAAAAATACGGTTTCGAGGTAGCGAAAAAAGGGTGTTGTGGGAGTGGCATTTTTGAAGCTGGGCCATTGTGCAACGAGCTCACACTGACATGCGAGGAGGCTTCAAAGTATGTATTTTGGGACAGCGTGCATCCAACTGAAGCAGCTTACAAGTATATTGCGAAGTATGTGGAGGAGGAAGTTCTGCCCAAGTTTGTGAATAGTAATAGCAGCGAATTATATTTATTTCAGAGGAAGCAACTTCAGAGAATCTTGTCATTTTCGTCTCTAGTTGCCAGCACGCACACAGATGTATTTTACAGAAAAGCGGGTAGAATGGGATGCAGGGGCAGAAGAGCAGTGTTAGTAAAGTTGATAAGTTCTGATAACCCAGATGGTATTAGCCTTAACTTTCCATGTCATCATCCTTGTTTTGGTCCGGGAAATGAAGAAAGAAAGGAAAGGACGATGCTCAGCAGAAAAGATGCTAGTGTACAGATAACAAGAAACACAATCCTTGAAGATTAG 1368 0.4218 MASPKIHFILLHIFTILIATSNAWKPKFSSILVFGDSTVDPGNNNFIETLFKGNHFPYGRDFPDHVPTGRFSNGKLVTDFVASLLDIKETVPPYLDPNLSDHELLTGVSFASGGSGLDDLTMVASGVIPVSKQIEYFREYVEKIKRIVGKEEAQKVLGRAIVIISAGTNDMSFNFYDVPTRKHEFDISGYQDFLQYRLQIFIKELYNIGCRKIAVVGLPPIGCIPLQITAKFRNPKDRKCIEQENLDSELYNKKLERLLLHVQATLPGSRVVYADVYNPFNNLINQPEKYGFEVAKKGCCGSGIFEAGPLCNELTLTCEEASKYVFWDSVHPTEAAYKYIAKYVEEEVLPKFVNSNSSELYLFQRKQLQRILSFSSLVASTHTDVFYRKAGRMGCRGRRAVLVKLISSDNPDGISLNFPCHHPCFGPGNEERKERTMLSRKDASVQITRNTILED 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1002 455 PANTHER GDSL ESTERASE/LIPASE EXL3 16 343 - -
Lele03g1002 455 Pfam GDSL-like Lipase/Acylhydrolase 31 344 IPR001087 GO:0016788
Lele03g1002 455 CDD SGNH_plant_lipase_like 30 344 IPR035669 -
Lele03g1002 455 SUPERFAMILY SGNH hydrolase 30 352 - -
Lele03g1002 455 FunFam GDSL esterase/lipase APG 20 348 - -
Lele03g1002 455 Gene3D SGNH hydrolase 19 349 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1002 Lele-ChrLele03 5809480 5812215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1002 9 348 Pollen Coat Proteome AT1G75910 35.277 7.47e-65 211