LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g1001	ATGGCTGAGAACGGCGAGGAGAAGTTATTGGCTGTTGCGCGCCATATAGCCAATTCCCTCGGTCATAATAACAACATGGCCGATGATATTCTCCAAATCTTCTCCACCTTCGATGGCAGGTTTTCCAGAGACAAGCTCTCCAACAAAGTCCCCCATGATGATCCCAGGGGCTGCGCCGCACTTGATCACACCCTCAAGTCTCTTGACCGTCGGATCTCCCAGTATGTGTCTTCGGACCACCCGATCTGGGCTGATTCTGCTGACTCCGCCGCCTTCCTCGACGCCATTGATGAGTTAATTGCTACCTTGGCCGAGTGGAGCCCGGTGGCAGCGGATAAGACCGTTAGGGCGTGCATGGTACGCGCCGAGGATATACTCCAGCAGGCCATGTTTCGCGTTGAGGACGAGTTCAGGATTCTGATGGAACTTGGTGGCGAGTCGTTTGACCTGACTCGAACTTATGCGAATGGCGAGTCGACTGGGAACTTGTCCTTTGACTCGGAGGAGGACGAAGACCATGAAGTTGAAGGCGTCATAGGGAACGGTGAGGATGACCAGATTCCGGTGGCCCAACCTGTGGCCGATTACGACATCATCATCGATGCGCTGCCATCGGCTACTATCAATGACCTGCACGAAATCGCAAAGCGCATGGTAGTTGCTGGTTTTGGGAAGGAATGCTCGCACGTGTATAGCAGCTGCCGCAGAGAATTCTTGGAGGAGAGCTTTTCGAGGTTGGGGTTGCAGAAGCTCAGCATTGAAGACGTTCACAAGATGCAGTGGCAGGAGCTCGAAGATGAGATTGAACGGTGGATCAAAGCTTCCAATGTGGCTCTCAGGATACTATTCCCCAGCGAAAGGCGTCTCTGTGATCGCGTCTTTTTCGGTTTCTCCGCAGCTTCCGATCTCTCTTTCATGGAGGTCTGCCGAGGATCAACTATTCAACTTCTGAATTTCGCCGATGCCGTGGCGATTGGAAGTCGATCTCCGGAGAGACTGTTTCAAAATCTTCCAGAAGTGGGGAAGCAAGCGGATAAGTATATTAGTTATGTAGGGGAAGACATTGAAGCAAAACTCAAGGATTTGTTTCAGGGAAGCAGTGGATCAATGGGGAGAAGGTAA	1122	0.5187	MAENGEEKLLAVARHIANSLGHNNNMADDILQIFSTFDGRFSRDKLSNKVPHDDPRGCAALDHTLKSLDRRISQYVSSDHPIWADSADSAAFLDAIDELIATLAEWSPVAADKTVRACMVRAEDILQQAMFRVEDEFRILMELGGESFDLTRTYANGESTGNLSFDSEEDEDHEVEGVIGNGEDDQIPVAQPVADYDIIIDALPSATINDLHEIAKRMVVAGFGKECSHVYSSCRREFLEESFSRLGLQKLSIEDVHKMQWQELEDEIERWIKASNVALRILFPSERRLCDRVFFGFSAASDLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFQNLPEVGKQADKYISYVGEDIEAKLKDLFQGSSGSMGRR	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g1001	373	Pfam	Exo70 exocyst complex subunit	269	337	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Lele03g1001	373	SUPERFAMILY	Cullin repeat-like	83	337	IPR016159	-
	Lele03g1001	373	Gene3D	Exocyst complex component Exo70	82	339	-	-
	Lele03g1001	373	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	59	337	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g1001	Lele-ChrLele03	5807481	5809391	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g1001	334	373	EXO70 exocyst subunit family	AT5G58430	55.000	1.33e-06	48.5