Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0998 ATGGCTAGGTTATACCCTCCCCTTTTGCCGCCGCCACCGCCACCGCAAGCACTCAACGAATGGCGGTGGCATCTTCGTCCACCTCTATCTCCTCAACATCATTTATCCGTTTCTTCCCATATCCAAATGAATGAAACCGTCGCGCTTCCCATCATTTGTCGTCCCGCCTTCGAAGGTCGAAGTGATGGCATCTTCTTTGGAGAAAACCCTTTGACCTACACCTTCCCTTTCCTCCTCTTCGAATTCTCTGTCGTCGTCCTTCTCACACGCGTCATTCGTTTCCTCCTTAAGCCTCTCAAACAACCTAAGATCATCGCCGAGATTATCGCTGGCATCTTGTTGGGGCCCTCAGTTCTGAGACATAAAACATGGTTTGCAAATAATATACACCCCGGAAACGCTGAATTTGTGGTCAACAATATTGGCGTAATGGGCTTCATGTTTTTTCTTTTCGTGTATGGCGTGAAGATGGACACTAGCCTCATAAAAAAAACAGGGAAAAAACATATTTCTATAGCTTTGATGAGTATACTCGTTCCCTCAATATCAGTTTTTTCTGTGGCGATGACCATGAGAAAGAACATGGACCAAGAGCTCGCCAAGATAACTTCATTAGGGGGCATTGCTATGTACATGGGACTCTCGTCATGTCCATTACTATTCATCGTCCTCAAAGATAACAACCTTCTCAGCTCCGAAGTGGGGCGATCAGCTATATCTACTGGTCTAATTGGTGACTTTGTTGGTATAACTATCGCAGTGGTGTTTGAAGCTGGAAAACAAGGAGACACAGGAACCATGCATGCTCTGTGGTTTATGCTCTCCCTGGCAGTTTATTCGCTTATTTTCTTCGTACTTATTCGAAGAGGGATGTTGTGGATTGGTGATATAACCCCAGAAGGACACGCAGTGAAATCGGATTATGTCACTTTGATTCTGTTGGGGATTTTTGTGGCGTCGTTTATGACTGACTTGGTCGGCTTATCGATCGGAGCCGGGGCGTTATGGCTAGGGTTGGTGATTCCGGCTGGTCCTCCTTTAGGGACAACCATTTTGGAGAAGACAGAGACAGTTATGACACAGTTTTTTATGCCATTCTCGTTCCTTTTGATCGGATACAACACTGATGTTTATGCCATGATTGCTGCTGGTTGGTCCTATGTTCATCCATTGTTCTGCATGGCTTTAACTGCGTATTTGACCAAGTTTTTCTCCACTTGGTTCACTACCATCTATTGGCGAATGCCTTTCAGAGATGGATTACCCCTCAGTCTCATCTTGAGCTTAAGAGGCCAGATCGAACTCATATTGTTCATGCACTGGCTGGACAAAAAGATGATAAAGCCACCAGGTTACACGATATTAGTACTGATGACGATAGCAGTGACAGCAATATTCACTCCTTTGATCATGATCCTCTACGATCCATCAAAACCATACATGGTGAACAAAAGGAGAACCATTCAACATACCCCTCCCGACACTGACCTCGTCATCGTACTCTCCATCCTTGACAGAGAAAGCATAAGTGGCATCATCAACCTCCTTGAACTTTCTGCTCCCACCTCAGGGAATCCCATGTCCATCTTCGCCCTTCACCTCATTGAGCTTTTAGGCCGAACCAACCCTGTCTTCTTCGACCACGACGAACAACAAGTCCCTCCAAAATACAAATGCATCCAAACCATTAATGCCCTCACGCAATTTCAGAGCGTCAAAGGCTTCGACTCTGTTAAGCTTCGTTTCTTCACTGCCATCACAAGCAAGCAAACCATGTATCAAGACGTATGTGAGCTAGCTTTAGAGAACAAAGCTACTCTGATCGTCTTATCACTTTATCAGGGAGCTATCACTCATAACCTCGAAGGAACAATAGTATCGGGGGAGGGATCAAGAACCGTGATATCCAACGTTTTAACTCAAGCTCCTTGCTCCGTCGGGATTCTCGTAGACAAGAGTGAGAATATCGGGAGTTTCATCAGAGGACAAGACAGCGTCAATGATTCGTTTGGTCGATCAGGACTGAAGCTTGTCGTGTTGTTTCTGGGAGGGGCGGATTGTAGAGAGGCTTTAGTTTATGCCGATCGAATGGTGTCGGGAAACGAAGAGTTGAGTTTGACGGTGGTGAGGTTTCTGGCGTTTAACCATGAAGGGGAGACGGAGACGGAGAAGAAGCTGGACGACGGAATGATGACATGGTTCTGGGTGAAGAATGAACGGAACGAGAAGGTGGAGTACAGAGAGGTGGTGGTTGAGGACGGCGAGCAGACGGTGGGAGCGATTCGGATGATGAATGATGGAAGTTATGATCTGTGGATTGTGGGGAGGAGACAGGGAATGAACCCTGTGATTCTGAGTGGGTTATCTAATTGGAGTGAGAACGAAGATTTAGGAGTGATAGGAGACTATGTTGCCTCTGTAGATTTTAGTAGTTCTGCTTCTGTTTTAGTTATGCAGCAGCAAATCCTTAGAGGGTAA 2478 0.4596 MARLYPPLLPPPPPPQALNEWRWHLRPPLSPQHHLSVSSHIQMNETVALPIICRPAFEGRSDGIFFGENPLTYTFPFLLFEFSVVVLLTRVIRFLLKPLKQPKIIAEIIAGILLGPSVLRHKTWFANNIHPGNAEFVVNNIGVMGFMFFLFVYGVKMDTSLIKKTGKKHISIALMSILVPSISVFSVAMTMRKNMDQELAKITSLGGIAMYMGLSSCPLLFIVLKDNNLLSSEVGRSAISTGLIGDFVGITIAVVFEAGKQGDTGTMHALWFMLSLAVYSLIFFVLIRRGMLWIGDITPEGHAVKSDYVTLILLGIFVASFMTDLVGLSIGAGALWLGLVIPAGPPLGTTILEKTETVMTQFFMPFSFLLIGYNTDVYAMIAAGWSYVHPLFCMALTAYLTKFFSTWFTTIYWRMPFRDGLPLSLILSLRGQIELILFMHWLDKKMIKPPGYTILVLMTIAVTAIFTPLIMILYDPSKPYMVNKRRTIQHTPPDTDLVIVLSILDRESISGIINLLELSAPTSGNPMSIFALHLIELLGRTNPVFFDHDEQQVPPKYKCIQTINALTQFQSVKGFDSVKLRFFTAITSKQTMYQDVCELALENKATLIVLSLYQGAITHNLEGTIVSGEGSRTVISNVLTQAPCSVGILVDKSENIGSFIRGQDSVNDSFGRSGLKLVVLFLGGADCREALVYADRMVSGNEELSLTVVRFLAFNHEGETETEKKLDDGMMTWFWVKNERNEKVEYREVVVEDGEQTVGAIRMMNDGSYDLWIVGRRQGMNPVILSGLSNWSENEDLGVIGDYVASVDFSSSASVLVMQQQILRG 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0998 825 Pfam Sodium/hydrogen exchanger family 84 469 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele03g0998 825 Gene3D - 77 478 IPR038770 -
Lele03g0998 825 PANTHER CATION/H + ANTIPORTER 53 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0998 Lele-ChrLele03 5795283 5797963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0998 49 822 Antiporter Super Family AT5G37060 42.642 0.0 678
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0998 03 5795283 5797963 Lele03g0998 03 5795283 5797963 ECH
Lele01g0997 01 5778009 5780708 Lele03g0998 03 5795283 5797963 hybridization
Lele02g1012 02 6226508 6227903 Lele03g0998 03 5795283 5797963 hybridization