Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0967 ATGCTCTACATTCTTCTTTGTGGTGTTCCTCCTTTTTGGGCAGAATCTGAGCATGGAATCTTCAATGCCATATTAAGAGGCCACGTAGATTTCTCAGCTGATCCATGGCCATCCATATCACCTTCAGCTAAAGATCTTGTCAAAAAAATGTTGAATTCTGATCCCAAGGCCAGGCTCACTGCCCACCAAGTTCTAAATCATCCATGGATTAAGGAGGATGGAGAAGCACCTGATACTCCTCTTGATAATGCTGTGCTCAACAGGCTCAAGCAGTTCAGAGCAATGAACCAATTCAAGAAAGCTGCTTTAAGGGTGATTGCTGGGTGCCTATCAGAGGAAGAAATAATGGGATTGAAGGAAATGTTCAAGAACATGGACACAGATGGCAGTGGAACCATTACAGTAGAAGAGCTCAAGCAAGGCCTTGCTAAACAAGGAACCAAGCTTTCTGAACAAGAAAATTTTTATTTAGGATTTGATCATAATTCTGGAGAAATGGATCCGAGCTCCGCAAACAAGAGAGGTGAAGATGATTTGCCACCAACAAATCCTGAGAAGAGGCCCGGAGGAGGCCAGCTAATATTTGTGAGGATGGCAAGCTTGAGAAAGTTTGAAGCTTCTTCTTCATCAGCCGCAGCACTCCAGGAACCATCCACTGAATTGACTCTGGGGATTGCTTCTTCGTTTCAACCAATGATCAGGAGGGCTGACGACGACAGTGGTGATCGCCGTGGGAAGAAGAAAATGATTTCCATGAATCCTCCAGCCCAAGACCCCGATGTTGTAGACCTGACTCTGGACGAAGACGATCTCCCGGTGTTGAAGAAATTCTTCGAAGTTGGCGAGGGCTCAGAGGAAACGGAAAGGATGAGAGATGAATTAATGAGGATTAGAGAATTTCGAAGGCTTCAAGAACAAATTCGAGCTCAAGAGATGCGTGGTTGGGGTGCTGACATTACGCTGATGTGCCCAAACCCTAACCCAGAAGCTAAACCTGGTGAAGCGCCATCAGACATGGAGGTTGGTACTGACAAGAGTCTCATAAACAAAGGGAAAGGAAAGGAGAAGGCTTAA 1074 0.4553 MLYILLCGVPPFWAESEHGIFNAILRGHVDFSADPWPSISPSAKDLVKKMLNSDPKARLTAHQVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKAALRVIAGCLSEEEIMGLKEMFKNMDTDGSGTITVEELKQGLAKQGTKLSEQENFYLGFDHNSGEMDPSSANKRGEDDLPPTNPEKRPGGGQLIFVRMASLRKFEASSSSAAALQEPSTELTLGIASSFQPMIRRADDDSGDRRGKKKMISMNPPAQDPDVVDLTLDEDDLPVLKKFFEVGEGSEETERMRDELMRIREFRRLQEQIRAQEMRGWGADITLMCPNPNPEAKPGEAPSDMEVGTDKSLINKGKGKEKA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0967 357 SUPERFAMILY Protein kinase-like (PK-like) 1 98 IPR011009 -
Lele03g0967 357 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Lele03g0967 357 ProSiteProfiles Protein kinase domain profile. 1 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0967 357 MobiDBLite consensus disorder prediction 235 260 - -
Lele03g0967 357 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 210 - -
Lele03g0967 357 ProSitePatterns EF-hand calcium-binding domain. 126 138 IPR018247 -
Lele03g0967 357 MobiDBLite consensus disorder prediction 319 357 - -
Lele03g0967 357 MobiDBLite consensus disorder prediction 158 191 - -
Lele03g0967 357 Gene3D - 88 110 - -
Lele03g0967 357 CDD EFh 118 153 IPR002048 GO:0005509
Lele03g0967 357 MobiDBLite consensus disorder prediction 235 249 - -
Lele03g0967 357 Gene3D - 111 153 - -
Lele03g0967 357 ProSiteProfiles EF-hand calcium-binding domain profile. 113 148 IPR002048 GO:0005509
Lele03g0967 357 Pfam EF hand 118 144 IPR002048 GO:0005509
Lele03g0967 357 SMART efh_1 117 145 IPR002048 GO:0005509
Lele03g0967 357 Pfam Protein kinase domain 1 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0967 357 SUPERFAMILY EF-hand 101 153 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0967 Lele-ChrLele03 5634128 5639984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0967 1 153 EF-hand Containing Proteins AT5G12180 88.889 7.43e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele03g0967 Pkinase 6.1e-12 CL0016