Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0960 ATGGCATCAACGGCTAGTTTTCTGTGGTTCTTCCTCGGGTTGGCCTCCTTCTTGTGTTGTGTTGGGTCCTTGTCGGACATCGAAGCTCTAACGGCTTTCAAGCTTAGCCTCAACGACCCCCTCGGCTCCTTGGATGGCTGGGATCCTTCCGCGCCTTCCGCTCCTTGTGACTGGCGTGGCATTTTCTGTTACGGCAACCGAGTTCGTGAGCTTCGTTTGCCTCGCCTTCAACTCACCGGTCAGCTCTCGGATTCCATCTCCAGCTTGCTTCAACTTCGCAAGTTGAGCCTTCATTCTAACAACTTCAATGGCGCCATTCCTCCTTCTCTCTCTCAATGCCTGCTCCTGCGTTCCGTTTATCTTCATAATAACTCTTTTTCGGGTAAACTCCCGCCGGGTCTTCTCCACCTCACCAACCTTCAAATCCTCAACGTTGCTCACAACTTTCTTTCTGGCCGAATTACCGGAGATTTTTCGAACTCTCTCCGGTTCCTTGATTTATCGTCGAATGCGTTTTCAGGTGATATTCCGGCTAATTTCTCGTCAAAATCTCAGCTACGACTCATCAACTTGTCCTACAATCGGTTTTCTGGTAGAATACCGGGTACTGTTGGAGTTCTGGGGCAGCTTGAGTATCTCTGGCTGGACTCCAACCAGTTGTATGGGACTCTGCCTTCGGCTCTAGCTAACTGCTCTTCTCTTGTGCATCTAAGCGCCGTAGACAATGCGCTTTCCGGTTTTATTCCGGCGACCATGGGGACGATGCCGAGACTTCAAGTGCTGTCGTTGTCGTCGAATCAACTATCGGGATCGGTCCCCACTTCACTGTTTTGCAATGTCCACTTGGCCAAATCTTCTTCGCTGAGAATCGTTCAATTAGGCTTTAATACACTCACGGGCATTTCCGAGCGGCCAAATGCAAGTTGTGTTAATGTTTTGGAGATTTTAGAGCTTAAGGAGAATCGTATTCGCGCTGCATTTCCCTCCTGGTTGACTAATGCGACGTCGTTAAGAGCTGTTGATTTTTCCGGAAACTACTTTTCTGGTATTTTGCCGGCGGATATTGGGAATTTATTGAGGCTAGAGGAGCTGAGGGTGGCAAACAATTCATTATCAGGTGATGTTCCTCGTGAGATTGTGAAATGTGCTTTGTTACAGGTTCTTGATCTTCAAGGAAACCGATTCTCCGGTCCCATTCCTTCATTTCTTGGCCAGCTGAGGAACCTCAAGATGTTATCTCTTGGCGATAACCTGTTTACTGGTCCTATACCCACGAGTTTGGGAACACCTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACGGGGGTTATACCCCCAGAATTAATGCGATTGAGTAATATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCAGGCCAACTTTCGTCTGCCATTGGGGACTTAACGGCTTTGCAGGTTCTGAATCTGAGTCATTGTGGATTTTCAGGAAAGATTCCTGCTAGTTTCGGCGGTTTAATGAAATTAACGGTGCTGGATTTAAGTGGACAAAGTCTTTCAGGTGACTTGCCAATCGAGCTTTTCGGATTACCTAGCCTGCAGGTTGTTGCTCTTCAAGAGAACCACTTATCTGGAGCTGTTCCAGAGGGTTTCAGCAGTGTAGTTACTCTACAATATCTTAACATCAGCTCCAATGTCTTTGCTGGTGAAATTCCAGCTACTTATGGATTTCTTCGGTCATTAATTGTTCTTTCTGCGTCTGAGAATCATATTTCTGGTAGAATAGCATCAGAGATTGTTAACTGTTCTCAACTTGAAGTGCTCGAGCTTCGTTCAAACCGTTTGCATGATAACATTCCTGGCTACATTGACCGTCTGAATCGTTTAAGGGTCCTAGATTTGGGAAACAACGAGTTAACAGGAGATATTCCAGAACAAGTATCTGAATGTTCTGCTTTGACTTCACTCCTCTTGGATGCTAATCAACTAACGGGTCAAATATCAGAATCCTTGTCAAGTTTGTCAAACTTGACTGCGTTGGATATCTCCTCAAACCAATTGAGCGGAGACATTCCGGCCAGCCTGTCACTCATATCTGGTTTGAAGCATTTAAATGTCTGCAGAAATAATCTTGAGGGTGAAATTCCAGAAATGCTGAGCTCCCGATTCAATGATCCTTCTATATTTGCAATGAATAACAGGTTATGCGGAAAGCCACTGCATAGAGAATGTGCAAATGTAGGGAGGCGAAAGAGGAGGAGGCTAATAATATTCATATGTGTGGCTCTTGGTGGACTATGCCTTTTGGGACTATGCTGCGGTGGCTATATTTACAGCCTCTTACGTTGGCGCAAGAAGCTGAGAGAAGGAGTAACAGGGGAGAAGAAGAAGAAGAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGGTCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGCAGAGACAATGGAAGCAACAAGACAATTTGATGAAGAGAACGTGTTGAGCAGAGGAAGGTACGGTCTTGTGTTCAAAGCCTCGTACCCAGATGGAATGGTGCTCTCAATCCGTCGTCTTCCTGACGGATCTATCGAGGAAAGAACCTTCCGTAAAGAAGCAGAATCATTAGGAAAAGTGAAGCACCGTAATTTGACAGTATTGCGTGGCTATTATGCAGGACCACCTGACGTGAGGCTTCTTGTTTATGACTACATGCCCAATGGAAACCTTGGCACTCTTCTTCAAGAAGCATCTCAGCAAGACGGCCATGTACTGAATTGGCCAATGCGTCATCTCATCGCTCTAGGCATTGCTCGCGGGCTAGCATTCCTACATTCAGTCTCAATAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAACAATCGCAACCCCAGCAGAAGCATCGTCATCGTCCACTCCTATAGGATCACTAGGGTACGTATCGCCGGAAGCAGCGTTAACCGGGCAAGCGACCAAGGAAGCTGACGTGTACAGCTTTGGGATTGTATTGTTGGAGATACTGACCGGAAGAAAACCGGTGATGTTCACGCAAGACGAAGACATAGTGAAATGGGTGAAAAGGCAATTGCAGAGAGGTCAGATATCGGAATTGCTTGAGCCTGGGTTGTTAGAGCTAGACCCTGAGTCATCGGAATGGGAGGAGTTCTTACTGGGGATCAAAGTGGCTCTTCTATGCACATCACCGGATCCTCTTGATCGGCCGTCAATGACTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTCGGACCGGAGATTCCATCGTCGGCCGATCCCACCACGTTACCTTCCCCTACTTGA 3393 0.463 MASTASFLWFFLGLASFLCCVGSLSDIEALTAFKLSLNDPLGSLDGWDPSAPSAPCDWRGIFCYGNRVRELRLPRLQLTGQLSDSISSLLQLRKLSLHSNNFNGAIPPSLSQCLLLRSVYLHNNSFSGKLPPGLLHLTNLQILNVAHNFLSGRITGDFSNSLRFLDLSSNAFSGDIPANFSSKSQLRLINLSYNRFSGRIPGTVGVLGQLEYLWLDSNQLYGTLPSALANCSSLVHLSAVDNALSGFIPATMGTMPRLQVLSLSSNQLSGSVPTSLFCNVHLAKSSSLRIVQLGFNTLTGISERPNASCVNVLEILELKENRIRAAFPSWLTNATSLRAVDFSGNYFSGILPADIGNLLRLEELRVANNSLSGDVPREIVKCALLQVLDLQGNRFSGPIPSFLGQLRNLKMLSLGDNLFTGPIPTSLGTPSELESLNLSNNKLTGVIPPELMRLSNMSALNLSNNKFSGQLSSAIGDLTALQVLNLSHCGFSGKIPASFGGLMKLTVLDLSGQSLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSVVTLQYLNISSNVFAGEIPATYGFLRSLIVLSASENHISGRIASEIVNCSQLEVLELRSNRLHDNIPGYIDRLNRLRVLDLGNNELTGDIPEQVSECSALTSLLLDANQLTGQISESLSSLSNLTALDISSNQLSGDIPASLSLISGLKHLNVCRNNLEGEIPEMLSSRFNDPSIFAMNNRLCGKPLHRECANVGRRKRRRLIIFICVALGGLCLLGLCCGGYIYSLLRWRKKLREGVTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETMEATRQFDEENVLSRGRYGLVFKASYPDGMVLSIRRLPDGSIEERTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRITIATPAEASSSSTPIGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTSPDPLDRPSMTDIVFMLEGCRVGPEIPSSADPTTLPSPT 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0960 1130 Pfam Leucine Rich repeat 671 686 IPR001611 GO:0005515
Lele03g0960 1130 Gene3D Ribonuclease Inhibitor 162 455 IPR032675 -
Lele03g0960 1130 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Lele03g0960 1130 Pfam Leucine rich repeat 432 489 IPR001611 GO:0005515
Lele03g0960 1130 PRINTS Leucine-rich repeat signature 670 683 - -
Lele03g0960 1130 PRINTS Leucine-rich repeat signature 433 446 - -
Lele03g0960 1130 Gene3D Transferase(Phosphotransferase) domain 1 912 1116 - -
Lele03g0960 1130 FunFam Piriformospora indica-insensitive protein 2 351 447 - -
Lele03g0960 1130 ProSiteProfiles Protein kinase domain profile. 836 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0960 1130 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 385 1108 - -
Lele03g0960 1130 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1116 - -
Lele03g0960 1130 Pfam Protein kinase domain 838 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0960 1130 SUPERFAMILY L domain-like 499 736 - -
Lele03g0960 1130 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Lele03g0960 1130 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Lele03g0960 1130 SMART serkin_6 836 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0960 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Lele03g0960 1130 Gene3D Ribonuclease Inhibitor 456 743 IPR032675 -
Lele03g0960 1130 SUPERFAMILY Protein kinase-like (PK-like) 815 1119 IPR011009 -
Lele03g0960 1130 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
Lele03g0960 1130 Gene3D Phosphorylase Kinase; domain 1 812 911 - -
Lele03g0960 1130 FunFam Leucine-rich repeat receptor protein kinase EMS1 200 304 - -
Lele03g0960 1130 SMART LRR_typ_2 137 160 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 670 694 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 431 454 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 478 501 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 622 646 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 207 231 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 358 382 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 89 113 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 406 430 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 526 549 IPR003591 -
Lele03g0960 1130 SMART LRR_typ_2 255 279 IPR003591 -
Lele03g0960 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 459 743 - -
Lele03g0960 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Lele03g0960 1130 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lele03g0960 1130 MobiDBLite consensus disorder prediction 788 816 - -
Lele03g0960 1130 SUPERFAMILY L domain-like 95 560 - -
Lele03g0960 1130 Gene3D Ribonuclease Inhibitor 24 161 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0960 Lele-ChrLele03 5593553 5596945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0960 1 1129 Receptor kinase-like Gene Family AT1G75640 64.349 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele03g0960 Pkinase 3.4e-32 CL0016