LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0956	ATGCTCTGGCAGAATATGGGAAGTGTTGAAGAAGGAATTAGTTTCTTTTGCTCTCCTCCTGCTTTGCTTTTGAATGTGGTGGAAATGATTGATGGAGGATGTTGTCCGACTATGGATCTGCTACGGTCGGAGCCAATGCAACTGGTCCAGCTCATCATTCCGACCGAATCGGCCTACCGAGCCATCTCTTACGTTGGCGATCTCGGCCTCTTTCAATTCAAAGATCTTAATGCAGAGAAAAGCCCATTCCAACGGACATATGCTGCTCAGACTAAAAGATGCGGGGAAATGACACGCAAGCTTCGGTTCTTTAAGGAACAAATGGCAAAGGCTGGTGTATCACACTCGACAAGGTCAATGAGCGATGGAGAAGTTGATCTGGACTATTTAGAGGTTAAACTTGCAGAGCTTGAAGCTGAGCTAATTGAGAATAATGCGAATAATGATAAGTTGCAACATAGTTACAGTGAGCTATTGGAGTATAAGCTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCACCGGCACAAAAAAGCGCAGCATCTCAACAGAGAGAAGTTGGAGTTCAGAGCAATTACGAAGGGTCTATTGACAGCCCATTGCTACAGGAACAAGAGATGACAACGGAAACATCAAAGCCAATTAAACTGGGCTTTATCGCTGGCCTTGTTCCAAGAGAAAAATCAATGCCTTTTGAAAGAATTTTATTTCGTGCTACCAGGGGTAACTTGTTTCTGAAGCAAGCCGTAATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTCTTATATTTTATTCTGGAGAAAGAGCTAATAGTAAAATTCTAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTAAGTATACAATTTCAGATGATTACAGAGGTGTCTGGAAGACTTTCCGAATTGAAGACTACAATTGATGTGGGATTGCTTCACAGGAATACTATATTGCAGACAATTGGATATCACTACGAGACGTGGAGCCTTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAACATCGATGTGACAAAGAAATGTCTTGTCGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAGCGCATTGCAGCGAGCAAGCCTGGACAGTAACTCACAAGTTGGGACTATATTCCAGGTTTTACAAACAAAGGAATCACCACCTACCTATTTCCGGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGTGTTGCCAAGTACCGCGAGGCAAATCCCGGGGTATTCACAATCATCACATTTCCATTCCTTTTTGCTCTTATGTTTGGTGATTGGGGGCATGGCATATGTTTATTGCTGGCTACTTTATATTTCATTATCAGAGAGAGAAAACTTTCTAGTCGGAAACTTGGAGACATCATAGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGTTGGCACTGTTCTCAATCTACACAGGATTGATATACAATGAGTTCTTCTCTGTTCCATTTGAACTATTTGGGCCATCTGCCTATGGATGCCGTGATCCTTCATGCAGGGATGCTGGTACAATGGGTCTCATTAGAGTCCGAAGAATTTATCCATTTGGTTTGGATCCTAAATGGCATGGTACTAGGAGTGAATTGCCATTTCTTAACTCCCTAAAGATGAAGATGTCAATCCTACTGGGTGTAGCCCAAATGAATCTTGGAATTGTACTGAGTTACTTTAATGCAAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTCATTCCCCAGATGATATTTTTAAATAGTTTGTTCGGTTATCTTTCACTCCTCATTATCGTTAAATGGTGCACTGGATCTCAAGCTGACCTGTACCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTGGGCCAAGAGTTCCTTCAAATTGTGTTATTATTGTTGGCGCTCATTGCTGTACCTTGGATGCTATTCCCGAAACCCTTTCTCCTGAAGAAGCAACATCAAGAAAGACATCAAGGTCAATCTTACTCTTTGCTTCACCCCATCGATGACCCTGTTGAAACAGAACCACACAGTAGTACTGATCACCATGAGGATTTTGATTTCAGCGAGGTTCTTGTGCACCAACTTATACACACAATAGAATTTGTTCTTGGCGCAGTATCTAATACAGCTTCATATTTACGTTTATGGGCTCTCAGTCTTGCTCATTCAGAGCTATCTAGTGTATTCTATGACAAAGTTCTACTTCTGGCATGGGGGTTTAATAACATATTCGTTCTCATTATCGGCATTACCGTTTTCATATTCGCAACTGTTGGCGTGCTTCTGATAATGGAAACTTTAAGTGCGTTCTTGCACGCTTTGAGGCTTCACTGGGTAGAGTTCCAGAATAAGTTTTACGAAGGAGACGGTTACAAGTTCTGCCCATTTTCATTTACTTTACTTAATGAAGAGGATGAAGCATAG	2541	0.4085	MLWQNMGSVEEGISFFCSPPALLLNVVEMIDGGCCPTMDLLRSEPMQLVQLIIPTESAYRAISYVGDLGLFQFKDLNAEKSPFQRTYAAQTKRCGEMTRKLRFFKEQMAKAGVSHSTRSMSDGEVDLDYLEVKLAELEAELIENNANNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAASQQREVGVQSNYEGSIDSPLLQEQEMTTETSKPIKLGFIAGLVPREKSMPFERILFRATRGNLFLKQAVIEHPVLDPLSGEKVDKNVFLIFYSGERANSKILKICDAFGANRYPFTDDLSIQFQMITEVSGRLSELKTTIDVGLLHRNTILQTIGYHYETWSLLVKKVKSIYHTLNMFNIDVTKKCLVAEGWCPVFATNQIQSALQRASLDSNSQVGTIFQVLQTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIITFPFLFALMFGDWGHGICLLLATLYFIIRERKLSSRKLGDIIEMTFGGRYVIMMLALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDAGTMGLIRVRRIYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVLSYFNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQEFLQIVLLLLALIAVPWMLFPKPFLLKKQHQERHQGQSYSLLHPIDDPVETEPHSSTDHHEDFDFSEVLVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIFVLIIGITVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYEGDGYKFCPFSFTLLNEEDEA	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0956	846	PIRSF	ATP6V0A1	36	846	IPR026028	GO:0000220\|GO:0046961
	Lele03g0956	846	PANTHER	VACUOLAR PROTON ATPASES	40	844	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Lele03g0956	846	Coils	Coil	120	154	-	-
	Lele03g0956	846	Pfam	V-type ATPase 116kDa subunit family	64	837	IPR002490	GO:0033179\|GO:0046961\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0956	Lele-ChrLele03	5561128	5568106	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0956	38	845	Primary Pumps ATPases(2)	AT4G39080	74.784	0.0	1263