Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0942 ATGTTAAAATCAAAATCCAGAGACCTCCCAGATTGTTTATGTTATAATCCACCCATCGTAATCCGCCCGAGTGCTGCTACACCAAATCACTCCCTCTATCTCTCAAACCTCGACGACCAAAAGTTCCTCAGATTCTCCATTAAGTATTGTTATCTGTTCAGCAAATCTGTGAGCTTCGATGCGTTGAAGCTTTCGTTGTCCAGAGTTCTAGTGGATTACTATCCATTAGCCGGGAGATTGAGAGCCAGCGATGAAGAACAAGGAAAGCTCCGTGTTGACTGTAACGGAGAAGGAGCTCTTTTCGTTGAAGCATTCATGCCCATCACTGCCGATGAATTACTTGAATCTTCAAACATGCCAAACAAGTCCTGGAAAAAGCTCTTATATAAGGTGGAAGCTCAGAGTTTATTGGACGTTCCTCCTCTTATTGTCCAGTTGACGAGTCTCCGATGCGGCGGAATGGTGCTGTGCACCGCCATCAACCACTGTATATGCGATGGAATAGGCACATCTCAGTTCTTAAATGCATGGGCCCACCTCACCAGATCGTCGGATTGTGATTTACCGGTTCTGCCCTTCCACTCTCGAGACCTCCTAAAGCCTCGAAATCCTCCAGAGGTAAAGGTTTCACACTCAGGATACACAACAAAAACTAACTCACCATCATCTCAGGTGGACCTGGTAAAGTTGTTGCAGTCTCAGCACCTGGTGGCCACGTGCTTCACTTTCACATTTTCTCATCTTCTTCATCTCAAGAAGCAGTGCGTTGTAAAGTGCACGACCTTCGAAGCTCTGGCTTCACACACGTGGCGCTCTTGGGTTCGATCACTGGACCTATCACCCGCTCTCAAGGTGAAGCTCCTTTTCTCTGTCAACGTTCGCAAAAAGCTGAACCCAGAAATCCCTCAGGGGTATTATGGGAATGGATTTGTGTTAGGATGCGTCGAGAGCACAGTAGAAGAGTTGCTTGAGGAGGCAGGCCTGAACAATGGCGTTAAACTGGTGCAACAAGGGAAGGCAAAGTTGGACGACGAGCATGTGAGGTCAATGGTTGATTTGTTGGAGGACAAAACGGTAAAAACGGATCTATCAGCTAGCTTGGTAATATCACAGTGGGCGAAGCTAGGGTTAGAGGAGGTGGACTTTGGAGGAGGGAAGGCACTGCAAATGGGGCCTTTAACCAGTGATATTTACTGTTTGTTTTTACCAGTGGTGGGTGATTCTGATGCAATAAGAGTGATGGTGTCAGTACCTGAAGGCGTGGTTGAAAAATTCGAGTTTTACATGAAAGAGTATATTTGGGATAAAGTAGAAAACGGACATGTCGTTTATAATAATGACGACAGAACTTTTGTGAGGAACAGGAAAGAAGGAGGCGTAAAACGGCATTATGAAAAGCGTGAAAAGGGAAAAATGAAAGGAGGCACGCGTAGGGTTAGGCTTTGGGAGGTGCAAGTTGAAACGCAGACGTCGTTTTCTGGGATTTCAGGAAGCTCTTTGTCGTACGAGTTTTACTGTTGTGTTATCAATTCACTTCTTCTTTCATGA 1548 0.4574 MLKSKSRDLPDCLCYNPPIVIRPSAATPNHSLYLSNLDDQKFLRFSIKYCYLFSKSVSFDALKLSLSRVLVDYYPLAGRLRASDEEQGKLRVDCNGEGALFVEAFMPITADELLESSNMPNKSWKKLLYKVEAQSLLDVPPLIVQLTSLRCGGMVLCTAINHCICDGIGTSQFLNAWAHLTRSSDCDLPVLPFHSRDLLKPRNPPEVKVSHSGYTTKTNSPSSQVDLVKLLQSQHLVATCFTFTFSHLLHLKKQCVVKCTTFEALASHTWRSWVRSLDLSPALKVKLLFSVNVRKKLNPEIPQGYYGNGFVLGCVESTVEELLEEAGLNNGVKLVQQGKAKLDDEHVRSMVDLLEDKTVKTDLSASLVISQWAKLGLEEVDFGGGKALQMGPLTSDIYCLFLPVVGDSDAIRVMVSVPEGVVEKFEFYMKEYIWDKVENGHVVYNNDDRTFVRNRKEGGVKRHYEKREKGKMKGGTRRVRLWEVQVETQTSFSGISGSSLSYEFYCCVINSLLLS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0942 515 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 419 - -
Lele03g0942 515 Gene3D - 17 216 IPR023213 -
Lele03g0942 515 Pfam Transferase family 20 427 - -
Lele03g0942 515 Gene3D - 226 431 IPR023213 -
Lele03g0942 515 SUPERFAMILY CoA-dependent acyltransferases 45 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0942 Lele-ChrLele03 5470399 5472958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0942 20 431 Monolignol Biosynthesis Gene Families AT5G48930 28.375 1.06e-51 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0942 03 5470399 5472958 Lele25g0191 25 1136985 1141998 CCT
Lele03g0942 03 5470399 5472958 Lele26g0199 26 1174590 1179257 CCT
Lele03g0942 03 5470399 5472958 Lele27g1892 27 23590018 23594958 CCT
Lele03g0942 03 5470399 5472958 Lele28g0204 28 1195792 1200496 CCT
Lele01g0945 01 5453411 5455573 Lele03g0942 03 5470399 5472958 hybridization
Lele02g0947 02 5740719 5742932 Lele03g0942 03 5470399 5472958 hybridization