Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0941 ATGGAGAAGAAATACGCATGCTACCATTCTCATCCTCCTTCCCAGCAGTCTTCTTCTTTATCCACCTCTTCTCTCTTTCCGCATCCACCCACCCATTCTTGGTCCTCGAATCTCGCTCTGAATAATGCTGGTAACTTGAACCCAAATTTCCAAGAGGAAAATCCCAGATCAAGAGGTTTCACGAACAAGAAAGACATTGGAGCTCATCATCATCATCTTCTCAACGCTTCAAGATTTGGTTATCACCAGTGGGCAAGTGCAGAAGAAAGCTGCTGCGTGAGCAGTACTCAGACAGATAACGACTTGGAGCTTCAGTATTCAAGGATAAAGGAAGAGATCTCAGACGTTTTCCCCTGTAAATTCACTGAAATGCTAAACAGTAGTACTAATTCCAGCATGGAGCATCACAAAGATTTCAATGCTCTTAGTGAGAAACTCTTGCTCAAGACCCTCTCTTCTGCAGGAGACTTCTATTCCACTTCTACTTCTCAGAATTTTGCTAATAATAATTTAGGTGGTGGTGGTGGTTTGGGTATGGGAGTGCCATCACCTTCTAGTAGAAGGAGCTTTAGCCAGATTTACCCGAGTGTCAATATTTCAAACTTAAACCATTCTTCAAGCTCTTTGGATGTGAACATGCACAGCTCAGATCTATTGAACTCTGCAAGATTTAATGGCGGTTTGAGCCACCAACATGCCCAAGATGGTTTACCCAGGTTTGACAACGTTTCTTTTCGTCTTGACCATCATATGCATCCCCACCAAATCGACCGGTCTCCATGCAACTCCAGCAATATTGTTAGGAAAGAGAAACTAGGTGATAGGATTGCTGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCCTCCGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAACCAAGTCGAGACACTAAGCGTTCCATACATGAAGTCATCACGGAACCAGGGCAACAGAGCGATGCAAGGGGTTTCAGGGTTATGTGAGGCGAAAGAAGAACCAAAGTTGGATTTAAGGAGCCGAGGCCTTTGTCTCGTGCCATTATCATGTATGTCTTACTTAGCTGCCGATGCCTCTGGTGGTGGAGTGTGGCAACAACCTGATTTTGGGGGCGCAACGCTATGA 1146 0.4494 MEKKYACYHSHPPSQQSSSLSTSSLFPHPPTHSWSSNLALNNAGNLNPNFQEENPRSRGFTNKKDIGAHHHHLLNASRFGYHQWASAEESCCVSSTQTDNDLELQYSRIKEEISDVFPCKFTEMLNSSTNSSMEHHKDFNALSEKLLLKTLSSAGDFYSTSTSQNFANNNLGGGGGLGMGVPSPSSRRSFSQIYPSVNISNLNHSSSSLDVNMHSSDLLNSARFNGGLSHQHAQDGLPRFDNVSFRLDHHMHPHQIDRSPCNSSNIVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNQGNRAMQGVSGLCEAKEEPKLDLRSRGLCLVPLSCMSYLAADASGGGVWQQPDFGGATL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0941 381 FunFam Transcription factor bHLH123 family 266 328 - -
Lele03g0941 381 CDD bHLH_AtbHLH_like 267 313 IPR045239 -
Lele03g0941 381 Gene3D - 257 328 IPR036638 GO:0046983
Lele03g0941 381 MobiDBLite consensus disorder prediction 10 26 - -
Lele03g0941 381 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 318 IPR036638 GO:0046983
Lele03g0941 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 256 305 IPR011598 GO:0046983
Lele03g0941 381 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 99 359 - -
Lele03g0941 381 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0941 Lele-ChrLele03 5453029 5457006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0941 69 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 38.046 2.11e-49 171