Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0900 ATGTTGAGGGACGAAACTGTCGGTTCGAGGAGCGCGAGGCACAGCGCCACCGTGTCTGCGGCATCAAATAAAGTTCTGGTGGCCGTGAAGGCGGAGATGGTGATCTCCAAGACCGCATTGACCTGGGCACTCACTCATGTCGTTCTCTCCAGTGATTGCATCACGCTGCTCGCTGTATACTGTGGCCAGAAAACTGGCAGAAGATTCTGGCATTTTTCGAGATTGGCGGGAGATTGCACGAACGGACGCCGGGAAAAGTTGCCGGAGCGGATTCGTGAAATCTCCGAGTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAGACTGAGGTGAGGGTGAAGGTCAAGGTGGTCTCAGGGATACCGAGTGGTGCGGTGGCAACTGAAGCAAGATGTAGTGGGTCTAATTGGGTCATACTGGACAAGAAGTTGAAACAAGAGGTGACGCATTGCCTGGATGAATTCAAATGTAGTATCGTGATGATGAAGGGTTCGCAGCCAAAAGTTTCAAGGCTTAATTTAGGGTCCTCTGATGAATTCCAAACCCCCACCTTTTCAGCTGCCTCTTCCCCAGGAATAGACATTGGAAGGCTGCGAGGTCACCGACTGAAGCCCTCCACTCCAGTCAGTAGCCCTGAAGAAGGAGCTACTTCTAATACTACATCTACCTTAGTAAATTCAGTGTCATCTTCTGACACTATGACTTCTTTTTTTGTGGTCTACGAACAAAATCCTCTGTTCAAGAGTCAGGGTCCACAGAGAAGGAAACAGAGACCAGTCAATGAACCCAAAAATTTCGACGACCAGCCACCATTAGCCTTTGAATTGGACAGGGAAAGGACTCTCACTTTGACCAAGTCCCAGGTATCATCTGTGGTTAGTGATGAGAAAAGTGTGTTTTGGAGTCCTCAAAATCACCTTGTCGATGAGAAGCCTCAAATAACTGAAAACATTGCAATTAGTCGAAGATCTAAATCTCCCACTTCTAAAACTTTACTCGAAAGATTTCTACATTGTAATCAGGATATGTGGAGTGATGAAGTGGGACATGAGCAAGCTCAAAGTGGAAATTATGTTGTGACATCATGCATCAAGGATACCATGCCTGCAGTTAGAACTTCCTCAGTACCTCCTCCCCTATGCTCACACTGTCAAAACAAAGTACCAGTTTTTGGAAAACCTCCTAGACGCTTCCATTACACAGAAATAGAGGAAGCTACTGATATGTTTTCAGATATGAATTTTTTGGCTGAAGGCGGATTTGGGATAGTTCACAAGGGAGTGCTACGAGATGGCCAGGTCGTTGCAGTGAAACAGTTAAAGTTTAGTGGATCTCAAGCAGATCTTGATTTCTGTAGGGAGGTCCGAGCATTGAGCTGCGCACAACACAGAAATGTTGTTCTGTTGATCGGATTCTGCGTAGAAGGCGATTTGAGGATATTAGTCTATGAGTACATACGCAATGGATCCTTAGAGCTCTATCTGCATGGAAAGAACAGAGGCGCTCTAGATTGGAACTTGCGCTTAAAGGTAGCAATAGGAGCTGCACGAGGCCTACGCTACCTTCATGAGGATTGTAGAGTGGGCTGTATAGTGCACAGAGACTTCCGACCCAGGAATATCCTCTTAACCCATGATTTTGAACCTGTGGTGGCGGATTTTGGTCTTGCAAGGTGGCAGTCGGAATGGAACATAAATGCTGATGATCGAGTCATTGGAACTTCAGGGTATCTTGCGCCGGAGTATCTTGAAGCTGGAAATCTTACATATAAAGTAGATGTGTATGCATTTGGAATTGTCTTGTTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACACAATAACGGACCCTCGTTTCTTTCCGAATTCTTTCACCCCCTCCGCGTGTTAGAACCCGATAATATTTTAGAAAATCTCCAAATTCTGAATCCATGCTTGGAGTTTGAGGCGTCACAAGAATTGAATCTTCAGTTACAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTTCGTCTAAATCCTGATGCCAGACCCCCAATGTCGAAGATCCTCAGAATGCTGGAAGGGGGCGATCCAGTTCTTCCTATTGGTTTAGACCTAAACTCAGTTGGTAACGCAAGTGGCCACTTAAGAGGACTGACGTCCCACGCTCAACCTCAAGGTACAAGAAGCCACTCTCGTAGGCTCTCATATTGA 2199 0.4616 MLRDETVGSRSARHSATVSAASNKVLVAVKAEMVISKTALTWALTHVVLSSDCITLLAVYCGQKTGRRFWHFSRLAGDCTNGRREKLPERIREISESCAQMVLQLHNQTEVRVKVKVVSGIPSGAVATEARCSGSNWVILDKKLKQEVTHCLDEFKCSIVMMKGSQPKVSRLNLGSSDEFQTPTFSAASSPGIDIGRLRGHRLKPSTPVSSPEEGATSNTTSTLVNSVSSSDTMTSFFVVYEQNPLFKSQGPQRRKQRPVNEPKNFDDQPPLAFELDRERTLTLTKSQVSSVVSDEKSVFWSPQNHLVDEKPQITENIAISRRSKSPTSKTLLERFLHCNQDMWSDEVGHEQAQSGNYVVTSCIKDTMPAVRTSSVPPPLCSHCQNKVPVFGKPPRRFHYTEIEEATDMFSDMNFLAEGGFGIVHKGVLRDGQVVAVKQLKFSGSQADLDFCREVRALSCAQHRNVVLLIGFCVEGDLRILVYEYIRNGSLELYLHGKNRGALDWNLRLKVAIGAARGLRYLHEDCRVGCIVHRDFRPRNILLTHDFEPVVADFGLARWQSEWNINADDRVIGTSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRISELEHNNGPSFLSEFFHPLRVLEPDNILENLQILNPCLEFEASQELNLQLQAMARAASLCLRLNPDARPPMSKILRMLEGGDPVLPIGLDLNSVGNASGHLRGLTSHAQPQGTRSHSRRLSY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0900 732 ProSitePatterns Tyrosine protein kinases specific active-site signature. 531 543 IPR008266 GO:0004672|GO:0006468
Lele03g0900 732 Gene3D Transferase(Phosphotransferase) domain 1 486 693 - -
Lele03g0900 732 SUPERFAMILY Protein kinase-like (PK-like) 389 689 IPR011009 -
Lele03g0900 732 MobiDBLite consensus disorder prediction 210 226 - -
Lele03g0900 732 MobiDBLite consensus disorder prediction 248 272 - -
Lele03g0900 732 MobiDBLite consensus disorder prediction 710 732 - -
Lele03g0900 732 MobiDBLite consensus disorder prediction 183 226 - -
Lele03g0900 732 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 382 485 - -
Lele03g0900 732 PANTHER OS01G0750732 PROTEIN 299 691 - -
Lele03g0900 732 FunFam Os07g0541700 protein 486 574 - -
Lele03g0900 732 ProSiteProfiles Protein kinase domain profile. 410 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0900 732 Pfam Protein tyrosine and serine/threonine kinase 415 654 IPR001245 GO:0004672|GO:0006468
Lele03g0900 732 Gene3D Phosphorylase Kinase; domain 1 374 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0900 Lele-ChrLele03 5221369 5226348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0900 398 689 Trihelix Transcription Factor Family AT5G38560 43.878 1.41e-72 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele03g0900 PK_Tyr_Ser-Thr 1.3e-40 CL0016