Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0878 ATGGAGACTATCAATATCAGATGCTCCTCTTCCACTTCTTCCTCTGATGACTCTTCCACTTCTGGCTCTTCCTTTTCCAGCAACCCCCAGAGGAATCATGACAACCCCGACAGAATCAAAGGCCCCTGGAGCGCCCAAGAAGACCGGATCCTCACCCAACTCGTTGAACGCTATGGGCCACGAAACTGGTCCTTGATTGGTCGCTACATTAAGGGGAGGTCCGGCAAGTCGTGCCGGCTGAGATGGTGTAACCAGCTGAGCCCCACCGTGGAGCACCGTCCGTTTTCCCGAGAAGAGGACGACACCATCATAGCGGCTCATGCTCAGTACTGTAACAGGTGGGCCACCATCGCCCGGCTTCTCCCGGGTCGGACCGATAATGCGGTGAAGAACCACTGGAATTCCACGCTCAAGAGAAGGGTGAGTGGGCAGCCTGCGGCGGATGGTGGCGCTGCAGGTGTTGCCAACGAGAGTTCTCCAGGATCTGTTCGGGCCTGCATGGGATTGGAATTAATGGAAAATGACCCGTTGACGGCGTTGACTCTGGCGCCGCCTGGAGCGAACATGGCGGTGGCTGAGCGGCGGCCAAGTTCAGAGAATGTGCCGGTGGGGTTCTTGGATGTGATGAGGGATGTGATAGCGAGGGAAGTCAGAGAGTATGTTTCTTCCACGTTTTCTGAGAACCCAGCAGGTTTCCATGGACATGTAGAGGAATGA 717 0.5593 METINIRCSSSTSSSDDSSTSGSSFSSNPQRNHDNPDRIKGPWSAQEDRILTQLVERYGPRNWSLIGRYIKGRSGKSCRLRWCNQLSPTVEHRPFSREEDDTIIAAHAQYCNRWATIARLLPGRTDNAVKNHWNSTLKRRVSGQPAADGGAAGVANESSPGSVRACMGLELMENDPLTALTLAPPGANMAVAERRPSSENVPVGFLDVMRDVIAREVREYVSSTFSENPAGFHGHVEE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0878 238 MobiDBLite consensus disorder prediction 1 45 - -
Lele03g0878 238 ProSiteProfiles Myb-like domain profile. 35 86 IPR001005 -
Lele03g0878 238 Pfam Myb-like DNA-binding domain 43 101 - -
Lele03g0878 238 PANTHER MYB PROTEIN-RELATED 40 173 - -
Lele03g0878 238 MobiDBLite consensus disorder prediction 1 32 - -
Lele03g0878 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 141 IPR017930 -
Lele03g0878 238 CDD SANT 42 84 IPR001005 -
Lele03g0878 238 SMART sant 91 139 IPR001005 -
Lele03g0878 238 SMART sant 39 88 IPR001005 -
Lele03g0878 238 Gene3D - 39 91 - -
Lele03g0878 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 90 IPR017930 -
Lele03g0878 238 FunFam MYB transcription factor 40 91 - -
Lele03g0878 238 SUPERFAMILY Homeodomain-like 37 133 IPR009057 -
Lele03g0878 238 CDD SANT 94 137 IPR001005 -
Lele03g0878 238 Gene3D - 94 141 - -
Lele03g0878 238 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0878 Lele-ChrLele03 5122519 5123235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0878 27 153 MYB Transcription Factor Family AT4G37260 68.217 1.32e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele03g0878 Myb_DNA-bind_6 2.8e-16 CL0123